Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4478 ATGACAAAGATGAATCCATTAGCATTAGCTATCATCTTGTGCACTATGGTTTCAAGTCACTGCATAATTATCCATCCAAAATCCAATGCTAATTTGATACAGCAAACTTGCAAACAAACTCCAAATTATGCAAATTGCATTCACTATCTCAAATCTGATCCAAGAAGTTCTGATGCAGATGTAACAGGTCTAGCACTAATCATGGTGGACATAATCAAATCCAAAGCAAACACTGCCTTAAACAAAATCAATCAGTTGATTAAGGGTAGCCATGATCAAAAGGAAGCTTTGAATTCATGTGCTGGTAGATACAGAGCAATTTTGGTAGCTGATGTGCCAAAATCTGTTGCAGCTTTGAAGCAAGGAGATCCAAAATTTGCAGAAGATGGTGCAAATGATGTTGCAATTGAAGCCACCACTTGTGAGAATGGATTCAAAGGGAAATCACCAATCTCTGATGAGAATATTGATATGCATGATGTAGCAGTCATAACAGCAGCTATTGTTAAACAATTGCTCTAG 522 0.3716 MTKMNPLALAIILCTMVSSHCIIIHPKSNANLIQQTCKQTPNYANCIHYLKSDPRSSDADVTGLALIMVDIIKSKANTALNKINQLIKGSHDQKEALNSCAGRYRAILVADVPKSVAALKQGDPKFAEDGANDVAIEATTCENGFKGKSPISDENIDMHDVAVITAAIVKQLL* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4478 173 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 172 IPR035513 -
Mtr4g4478 173 SMART PMEI_2 28 168 IPR006501 GO:0004857
Mtr4g4478 173 CDD CIF_like 30 172 IPR034087 GO:0004857|GO:0043086
Mtr4g4478 173 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 12 173 - -
Mtr4g4478 173 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 173 IPR035513 -
Mtr4g4478 173 Pfam Plant invertase/pectin methylesterase inhibitor 31 168 IPR006501 GO:0004857
Mtr4g4478 173 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 172 IPR006501 GO:0004857
Mtr4g4478 173 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4478 Mtr-Chr4 58759003 58759751 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4478 - - mtr:MTR_4g122760 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4478 4 58759003 58759751 Mtr4g4478 4 58759003 58759751 ECH
Mtr2g1182 2 12872104 12872879 Mtr4g4478 4 58759003 58759751 PCT