Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4476 ATGAAGAGAGCCTCAACTAACTTTATGTCCTTTTTCCCTCTTTATACTCTTCTTCTTTCATGTTTTTTTCTCAAACTCACTCAATCCTTTACTCAAATGAACGTTGAAGTTGATGATTTGGTGGATGATATATGCAAAAAGACACCAAATTCTGATCTATGCAGTTCAATCCTACATTCCAATCCTCAAGCCAACACAACTGATGCAAAGGGTATAGCCGCAATAATGGTCAATGACATTCTAGAAAATGCCACCAACACATTGAATTATATTCAAGTTCTTGTCAACCAAACCAAAGATATTGAATTGCAAAGAAAATTTTCTATTTGTGCTGAGACATATATTCCATTAGTGAAAACCGTACTTCCACAAGCAATTGATTCTATAAACCAAAATAAATATGGTTTGGCTGCTTACTCAATGGTTTATGTTGGAAAGGAAATTGACTCTTGTAACAAGAAATTCTCAGGCTCAACTACTTCACCTTTAGGTGATAGGACTGACATTCTACATAAGTTGCTTGATATTGCTGCAGCCATACTTAAGCAATTAATAAGTGGCTGA 564 0.3493 MKRASTNFMSFFPLYTLLLSCFFLKLTQSFTQMNVEVDDLVDDICKKTPNSDLCSSILHSNPQANTTDAKGIAAIMVNDILENATNTLNYIQVLVNQTKDIELQRKFSICAETYIPLVKTVLPQAIDSINQNKYGLAAYSMVYVGKEIDSCNKKFSGSTTSPLGDRTDILHKLLDIAAAILKQLISG* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4476 187 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 184 IPR035513 -
Mtr4g4476 187 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 185 IPR035513 -
Mtr4g4476 187 SMART PMEI_2 36 180 IPR006501 GO:0004857
Mtr4g4476 187 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 11 187 - -
Mtr4g4476 187 CDD CIF_like 38 184 IPR034087 GO:0004857|GO:0043086
Mtr4g4476 187 Pfam Plant invertase/pectin methylesterase inhibitor 39 180 IPR006501 GO:0004857
Mtr4g4476 187 TIGRFAM PME_inhib: pectinesterase inhibitor domain 16 184 IPR006501 GO:0004857
Mtr4g4476 187 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 187 - -
Mtr4g4476 187 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4476 Mtr-Chr4 58748269 58748875 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4476 - - mtr:MTR_4g122720 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4476 4 58748269 58748875 Mtr2g1182 2 12872104 12872879 PCT