Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4463 ATGTGTCCATCTGACCGCAACCTCCGCCCACAACCTACCGCAACCGATTTTCGACCGGCATTCGACATTCTTGACACCGATTGCGATGGCAAAATAAGCCGTGATGACCTCCGTTCGTTCTACACCACCGTGACAGGTGGTGTGAACGGAGGAGACGATGCAATCCGTGCCATGATGTCGGTGGCGGACACCAACAAGGATGGATTCGTGGAGTACGAGGAATTCGAGCGGGTGGTTAGCGGAAACAACGGAGAAAAGAGACCGTTGGGATGTGGGGCCATGGAAGATGTGTTCAAGGTGATGGATAGAGATGGTGATGGTAAGCTTAGTCATGGAGATTTGAAGAATTATATGGCTTGGGCTGGTTTTGCTGCTTCCGATGAAGAGATTAATGCTATGATTAAGCTTGGTGGTGGTGATCAAAACGGTGGCGTTAGCTTCGATGGTTTGATTCGTTTATTAGCTCTTGATCATTTTGTACCAGCTAATTAA 492 0.4858 MCPSDRNLRPQPTATDFRPAFDILDTDCDGKISRDDLRSFYTTVTGGVNGGDDAIRAMMSVADTNKDGFVEYEEFERVVSGNNGEKRPLGCGAMEDVFKVMDRDGDGKLSHGDLKNYMAWAGFAASDEEINAMIKLGGGDQNGGVSFDGLIRLLALDHFVPAN* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4463 163 ProSiteProfiles EF-hand calcium-binding domain profile. 50 85 IPR002048 GO:0005509
Mtr4g4463 163 ProSiteProfiles EF-hand calcium-binding domain profile. 12 47 IPR002048 GO:0005509
Mtr4g4463 163 ProSitePatterns EF-hand calcium-binding domain. 25 37 IPR018247 -
Mtr4g4463 163 SUPERFAMILY EF-hand 16 154 IPR011992 -
Mtr4g4463 163 Pfam EF-hand domain pair 17 79 IPR002048 GO:0005509
Mtr4g4463 163 PANTHER CALCIUM-BINDING PROTEIN CP1 1 158 - -
Mtr4g4463 163 SMART efh_1 93 121 IPR002048 GO:0005509
Mtr4g4463 163 SMART efh_1 129 157 IPR002048 GO:0005509
Mtr4g4463 163 SMART efh_1 16 44 IPR002048 GO:0005509
Mtr4g4463 163 SMART efh_1 54 82 IPR002048 GO:0005509
Mtr4g4463 163 PANTHER TROPONIN 1 158 - -
Mtr4g4463 163 ProSitePatterns EF-hand calcium-binding domain. 63 75 IPR018247 -
Mtr4g4463 163 ProSitePatterns EF-hand calcium-binding domain. 102 114 IPR018247 -
Mtr4g4463 163 Pfam EF hand 94 116 IPR002048 GO:0005509
Mtr4g4463 163 Gene3D - 4 160 - -
Mtr4g4463 163 ProSiteProfiles EF-hand calcium-binding domain profile. 94 124 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4463 1 154 EF-hand Containing Proteins AT5G49480 55.828 7.42e-55 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4463 K02183 - gmx:100527230 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4463 4 58607669 58608424 Mtr4g4463 4 58607669 58608424 ECH