Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4460 ATGGGGATCAATTTGAACAGGGTCACTATTGTTGATATTGAGCTTCGAATTTTCTTCATAGTCTTGGTCTTTTTTAAGATTTCAACTTCAGACAATCTACCTGCAAATTTTGTATTTGGAGATTCTCTAGTTGATGTAGGAAACAATAATTACATTATTTCTCTCTCAAAGGCTAATTTTTTGCCTAATGGTATCGATTTTGGAAGACCAACAGGGAGATTCACCAATGGAAGAACCATAGTTGACATCATTGGTCAGGAATTGGGTTTTGGACTCACCCCGCCTTATTTGGCACCTACAACAATTGGACCAGTGATTTTGAAGGGTGTCAATTATGCCTCTGGTGGGGGTGGAATTCTCAATCACACTGGACAAGTCTTTGGTGGTCGACTCAACATGGATGCACAAATAGATTATTTTGCAAATACCAGACATGACATAATCTCCTACATTGGAGTTCCTGCGGCTCTCAATCTATTACAAAATGCATTGTTTTCGGTTACAATCGGTTCAAATGATTTCATTAATAACTACTTAACACCGGATGTCGCACTTTCCGAGGACAAATTGGATTCACCTGAACTCTTTGTGACCACCATGATATCAAGACTAAGAACACAGCTCGCTAGGTTGTACAATCTGGGAGCTAGAAAAATTGTTGTGGCAAATGTGGGGCCAATTGGGTGCATACCAAGTCAAAGGGATGCACACCCAGCTGAAGGAGATAATTGTATCACTTTTGCTAATCAGATGGCACTTTCATTTAACACACAATTAAAGGGTCTAATTGCAGAGCTAAACTCAAATTTAGGTGGTTCAATATTTGTATATGCAGATATATATCACATTTTAGCAGACATGCTCGTAAATTACGCAGCATTTGGTTTTGAGAATCCTTCTTCTGCTTGCTGCAACATGGCTGGGAGATTTGGAGGGTTGATCCCATGTGGTCCTACGTCAAAGGTTTGTTGGGACAGATCCAAATATATTTTTTGGGACCCTTATCATCCTTCTGATGCTGCAAATGTTGTTGTCGCCAAACGCCTACTAGATGGTGGTGCCCCGGATATTTCGCCGATGAACATTCGTCAACTCTTTCAATCTTAA 1107 0.4011 MGINLNRVTIVDIELRIFFIVLVFFKISTSDNLPANFVFGDSLVDVGNNNYIISLSKANFLPNGIDFGRPTGRFTNGRTIVDIIGQELGFGLTPPYLAPTTIGPVILKGVNYASGGGGILNHTGQVFGGRLNMDAQIDYFANTRHDIISYIGVPAALNLLQNALFSVTIGSNDFINNYLTPDVALSEDKLDSPELFVTTMISRLRTQLARLYNLGARKIVVANVGPIGCIPSQRDAHPAEGDNCITFANQMALSFNTQLKGLIAELNSNLGGSIFVYADIYHILADMLVNYAAFGFENPSSACCNMAGRFGGLIPCGPTSKVCWDRSKYIFWDPYHPSDAANVVVAKRLLDGGAPDISPMNIRQLFQS* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4460 368 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE SUPERFAMILY PROTEIN 20 367 - -
Mtr4g4460 368 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 20 367 - -
Mtr4g4460 368 Gene3D SGNH hydrolase 24 352 IPR036514 -
Mtr4g4460 368 Pfam GDSL-like Lipase/Acylhydrolase 37 348 IPR001087 GO:0016788
Mtr4g4460 368 SUPERFAMILY SGNH hydrolase 107 351 - -
Mtr4g4460 368 CDD SGNH_plant_lipase_like 34 352 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4460 Mtr-Chr4 58583828 58585544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4460 33 368 Acyl Lipid Metabolism Gene Families AT4G10950 35.398 1.17e-70 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4460 - - gmx:100791871 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4460 4 58583828 58585544 Mtr4g4460 4 58583828 58585544 ECH
Mtr4g4460 4 58583828 58585544 Mtr2g1199 2 13016430 13018276 PCT