Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4454 ATGACTATCATTAACTACACCCCTCTGTTCTTCCTCTGCTTCATAACCCCCCTTGCACTTAGCAATGTTGAAATACATTCAGCAGGCCCTTCAACACAGATTTTGCATTCTTTCAATGAAGACAGAAACGGCTCTATAACACTGTCAGTGAAAGCAGAACATGCACACTCTACTTCCACTAAATTTTCATGGCATGGTTCTTGCACAAACAAAGACATAAGCATTTCACAAAGTAGAGAGACTCTAACTGGAATCCCTAAGTATGTAGTGCAAATTGTCAATACTTGTGTTTCTTCTGAGTGTGCTCCATATAATATTCACCTTCACTGTGGCTGGTTTGCTTCTGCAAGAATAATCAACCCTAAATTGTTCAAGAGACTATCTTTTGATGATTGTTTGGTGAATGGAGGAAAACCTTTAACCTCTAGTCAAATCATTAGATTCACTTATACCAATTCTTTTGTTTATCCTCTTGCACTCAAGTCTGCCAAATTTTGCTGA 501 0.3812 MTIINYTPLFFLCFITPLALSNVEIHSAGPSTQILHSFNEDRNGSITLSVKAEHAHSTSTKFSWHGSCTNKDISISQSRETLTGIPKYVVQIVNTCVSSECAPYNIHLHCGWFASARIINPKLFKRLSFDDCLVNGGKPLTSSQIIRFTYTNSFVYPLALKSAKFC* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4454 166 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE 37 166 - -
Mtr4g4454 166 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 37 166 IPR040361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4454 Mtr-Chr4 58542615 58544045 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4454 - - aprc:113852241 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4454 4 58542615 58544045 Mtr4g4454 4 58542615 58544045 ECH