Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4449 ATGTCCAGGTTTGCGATTGAATCCATTATGCAGAGAAAAAGAAGTGATGTGCTACGAAAACCTAGGGTTAATTGTGATGCAATATTTCAGCATTACTTTGGGTTGTTATCATCACATGCTCACAATGAGAAGAATGTGAAAGATACAATTGTTGTTTCTGATGGATTAAAAACTGAAAATAAGCTCAAGAAGCTTAAGCTCAAATTTGGGGGTGTTACTCATACTATTCATACCAAGCCTTCTTCTGATGCTCGTAACCCTAAGGACAATGCAGGTAATGATGTCCACTCTTATGATAAGAAGAGAGGCCATGGGGACAAATTGGTTAAGCTTTCAAGAACTGATCATAGTCATGCTGCTGAGAATCATTCACATAAAAGAAAGGCAACTGAACAACATGTCCGTAAGAGCAAGCGAGTTACTGAGAAATGTGCCATGGATGTGGGGTGTAGCGATGAAGATGATGATGCAGAACTTCATTTTCTTGAAAAAATCAATGCATCAAAAAGAGGAGTTAGTCGCCATAAGGATAATCAAGGAGGCACAACAATGCGTGGTGTTTGTAAAGATGCATCAGGAAAGAACTATGAGGATCGGGACTATATGCAAGAAGACCCTACATCAAGTGATGAATCAATATTAGAAGGGAAGAAGCCAAAGAGGGAATCTGTTGGTTTACTTGTACCAAGAAAGCATTCCACCCGCAATAATCATAATTGTTCAGTTGAGTCTTTCAAAGATGCGCTATCTGGGTCAGTTGCAAGCATTATTGACATCTCAGATAAAAAGGGCAAGTTGTCAGAGGAACAGCTAATCAAGAAAGCTGAGGCTGCAAAGAGACGAAAAATTCAAGCTGAGAAGGCAGCTAGGGAGGCCGAGGAAGCAGCCATTAAGAAGATACTTGGTCAAGATCCTGCTAGGAAGAAGAAAGAGGAAAAGATGAATAAGCACAGGGATGAAATAGCCAAGGAAAAATCTAGCAAACCCTTCAATCTAGCATCAAACACTGTTCGATGGACTATGGGTCCCAATGGAACCGTAGTAACTTTTTCTGATGATATTGGTCTGCCAAGTATCTTCCAAACAATGCCTAACAGTTATCCTCCCCCAAGAGAAAAGTGCGCAGGTCCAAACTGCACTAATGCTTACAAGTATCGGGATTCCAAGTCAAAGCTTCCCCTTTGTAGTCTTGGTTGTTACAAAGCAATTCATGAAAAAATCTCACCTGTGATTGCATGTTAG 1242 0.405 MSRFAIESIMQRKRSDVLRKPRVNCDAIFQHYFGLLSSHAHNEKNVKDTIVVSDGLKTENKLKKLKLKFGGVTHTIHTKPSSDARNPKDNAGNDVHSYDKKRGHGDKLVKLSRTDHSHAAENHSHKRKATEQHVRKSKRVTEKCAMDVGCSDEDDDAELHFLEKINASKRGVSRHKDNQGGTTMRGVCKDASGKNYEDRDYMQEDPTSSDESILEGKKPKRESVGLLVPRKHSTRNNHNCSVESFKDALSGSVASIIDISDKKGKLSEEQLIKKAEAAKRRKIQAEKAAREAEEAAIKKILGQDPARKKKEEKMNKHRDEIAKEKSSKPFNLASNTVRWTMGPNGTVVTFSDDIGLPSIFQTMPNSYPPPREKCAGPNCTNAYKYRDSKSKLPLCSLGCYKAIHEKISPVIAC* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4449 413 SMART PAPA_1_2 269 354 IPR006880 GO:0031011
Mtr4g4449 413 MobiDBLite consensus disorder prediction 191 218 - -
Mtr4g4449 413 Pfam PAPA-1-like conserved region 269 353 IPR006880 GO:0031011
Mtr4g4449 413 Coils Coil 307 327 - -
Mtr4g4449 413 MobiDBLite consensus disorder prediction 305 326 - -
Mtr4g4449 413 PANTHER PAPA-1-LIKE FAMILY PROTEIN / ZINC FINGER (HIT TYPE) FAMILY PROTEIN 7 413 - -
Mtr4g4449 413 MobiDBLite consensus disorder prediction 81 128 - -
Mtr4g4449 413 MobiDBLite consensus disorder prediction 75 138 - -
Mtr4g4449 413 PANTHER INO80 COMPLEX SUBUNIT B 7 413 IPR029523 GO:0006338|GO:0031011
Mtr4g4449 413 MobiDBLite consensus disorder prediction 305 327 - -
Mtr4g4449 413 Pfam HIT zinc finger 370 401 IPR007529 -
Mtr4g4449 413 Coils Coil 268 295 - -
Mtr4g4449 413 MobiDBLite consensus disorder prediction 171 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4449 Mtr-Chr4 58478303 58482457 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4449 - - cam:101504308 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4449 4 58478303 58482457 Mtr4g4449 4 58478303 58482457 ECH