Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4442 ATGGGAGCGCCAGAGAAATCTCAAACCAACGCTAGTTCCATGCAGCGTGTCAAGGTGTACCGTCTGAATGATGATGGAAAATGGGATGACCAGGGTACAGGGCATGTAACTATTGATTATTTGGAGCGATCAGAGGATCTGGGCTTATTTGTTTATGACGAAGAAGACAACGAGACCATACTTTTGCATCGCATCAGTGCTGATGATATTTATAGGAAGCAAGAAGATTCAATTATCTCATGGAGAGATCCCGAATATGCCACAGAATTGGCACTCAGCTTTCAAGAGCCTAGCGGATGCTCTTACATATGGGACCATATTTGCAATGTGCAGAGGAATATGCAATTCAATACTTTAAATAATGAGTCATTTCAGAGCACCAACAGTGAGTTAAGGGAGTTGCCTGCTGTTGAACTAACAACACTCCCATTGATTCTTAAGACCGTTGTTGACAGCAGCATTTCAGATCAAATACGACTAACAGAGCTACTATCAAGTAATCAAGAATTTTTTCGAAAGCTGATGGGGTTATTTAGAGTCTGTGAAGACTTGGAAAACATGGATGGCCTTCACATGATTTTCAAAATCGTCAAAGGGATCATTTTACTTAATAGTCCAACAATTCTTGAGAGAATTTTTAAGGAAGAGTTTATAGTGGACATCATCGGTGCCCTTGAGTATGATCCGGACATTACTTGTGTTCAGCATCATCGTAAATTCTTAAAGGACCATGTTGTTTTTAAGGAGGCTATACCTATAAAAGATCCCAATGCACTAGCGAAGATACATCAGACATATAGAGTTGGTTATTTGAAGGATGTTGTTTTGGCCAGAGTCTTAGATGACGCTACTTGTGCAACCGTTAACTCCATAATACATGCAAACAATGCCTTTGTTATTGCTATGTTGAAGGATGACAATACATTTATCCAGGAGTTGTTTGCTAGGTTAAAATCTCCCACAACCTCTCAAGAATCAAAAAAGAACTTGGTCCATTTCTTGTATGAGTTTTGTAGTGTAAGCAAGAGCTTGCAGATGGTCCAGCAGCTTCGGCTATTTAGGGATCTGACAAATGAAGGCATCTTTGACATTGTCAGTGAAGTTTTGCAAAGTCAAGACAAGAAACTTGTGCTAACTGGAACAGACATCCTCCTTCTTTTTATGAATCAGGATCCTAATCTTCTGCGGTCATATGTTGTTCGGCAGGAAGGAATTGCTCTTCTAGGACTCTTGGTTAAGGGAATGGTAACAGACTTTGGAGAGAGCATGCACTGCCAGTTTCTTGAGATTCTTCGTATTCTATTGGACTCGAGCACATTGTCTGGACCACAGAGGGACGCTATCATTGACATCTTCTTTGAGAAGCATTTGGGTCATTTGATTGAGGTTATAACAGCGTCATGTCCTTCAGAAAATACTGCCGGTGCTAGTAAATCAATAGGTCCTGGACAAAGTGTTCAATTTCAGCGCAGAACAAAATCGGAGATATTATCAAATATATGTGAATTACTATGCTTTTGTGTCCTCCATCACCCATACAGGATAAAGTGCAATTTTCTTCTCAATGATGCAATTGAAAATGTTCTGCTATTGACACGGAGAGCAGAAAGATACTTAGTAGTTTGTGCTGTCCGGTTTGTTCGAACTGTTCTCTCCCGCAATGATGAGCATATGATAAATTATTTCGTTAGGAATAACATTCTCAAACCAATTATAGACGCCTTTGTTGCTAATGGCAATCGCTATAATCTTCTCAATTCTGCTGTTCTGGAACTTTTTGAGTATATTCGGAAGGAGAATAACCTGAAATTATTGCTAAAACACCTAGTTGATTCTTTTTGGGATCAACTGGTAAAGTTTGAGCATTTGGTTTCAATTCGCTCGCTGAAAGTAAAATATGAGCAGTGTGTGGATAATGGTGGGAACAACGCTGGTGCGGTAATGGACCTTAGAAGAAGAATTGATGAGCGTGCTGTAGAGAGAGAAGAAGAAGAACGTTACTTTAATGAGGACAGTGATGAGGAGGATGCAGCATCTCCATCTGTTTCACGTGATCATAAAGGTCATCAACAACCTATTGTTTCCAATGGAGTTACTTCAAACCATCCGCAGCCAAGTCGAACGTCACTGGTTGACTATGAAGATGATGAGGATGATGAAGATTATAAACCACCACCAAGAAAGCAGAAAGAAGCATCAGAGGAAGATGAAGGGATAATGGAGTCTCTCAGGCTGAAAAGAAAACTTCCTTCACAGGACAGAGAGCCCGAACTTGTGAAGAAGCAGAAGTTAACAAAGAATTCAAAATCTAAAGATAGTGTCTTTGCTGCCTTGTGTTCAACCTTGAGCCAAGCTGTGCTACCTAATAAGAAGTCTGCAATCAATATTCATACGGGTGCTCGAAGAGTTGAAGGGAGGGTGAGTTCTAGTGAAGACAATCAGGAAGACAGACAAAATGTTTCTAGAAGTGGCTCTGATAATAGCAACACAGGGGCTGAGGATAACCATGTAGAGAAAGATACTTCAGCCTCTAGAAGCATTTCTGATTGTTTGCATGCAAAATCAGATAACATACAATTGGGGGGCGAGGAACGTCCACTGGTCCCCCCTAAATCCTCGCCAGAGATGGCAGTAAATGGATCATAG 2646 0.4059 MGAPEKSQTNASSMQRVKVYRLNDDGKWDDQGTGHVTIDYLERSEDLGLFVYDEEDNETILLHRISADDIYRKQEDSIISWRDPEYATELALSFQEPSGCSYIWDHICNVQRNMQFNTLNNESFQSTNSELRELPAVELTTLPLILKTVVDSSISDQIRLTELLSSNQEFFRKLMGLFRVCEDLENMDGLHMIFKIVKGIILLNSPTILERIFKEEFIVDIIGALEYDPDITCVQHHRKFLKDHVVFKEAIPIKDPNALAKIHQTYRVGYLKDVVLARVLDDATCATVNSIIHANNAFVIAMLKDDNTFIQELFARLKSPTTSQESKKNLVHFLYEFCSVSKSLQMVQQLRLFRDLTNEGIFDIVSEVLQSQDKKLVLTGTDILLLFMNQDPNLLRSYVVRQEGIALLGLLVKGMVTDFGESMHCQFLEILRILLDSSTLSGPQRDAIIDIFFEKHLGHLIEVITASCPSENTAGASKSIGPGQSVQFQRRTKSEILSNICELLCFCVLHHPYRIKCNFLLNDAIENVLLLTRRAERYLVVCAVRFVRTVLSRNDEHMINYFVRNNILKPIIDAFVANGNRYNLLNSAVLELFEYIRKENNLKLLLKHLVDSFWDQLVKFEHLVSIRSLKVKYEQCVDNGGNNAGAVMDLRRRIDERAVEREEEERYFNEDSDEEDAASPSVSRDHKGHQQPIVSNGVTSNHPQPSRTSLVDYEDDEDDEDYKPPPRKQKEASEEDEGIMESLRLKRKLPSQDREPELVKKQKLTKNSKSKDSVFAALCSTLSQAVLPNKKSAINIHTGARRVEGRVSSSEDNQEDRQNVSRSGSDNSNTGAEDNHVEKDTSASRSISDCLHAKSDNIQLGGEERPLVPPKSSPEMAVNGS* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4442 881 SUPERFAMILY PH domain-like 15 111 - -
Mtr4g4442 881 SUPERFAMILY ARM repeat 130 603 IPR016024 -
Mtr4g4442 881 MobiDBLite consensus disorder prediction 804 819 - -
Mtr4g4442 881 Gene3D - 11 131 IPR011993 -
Mtr4g4442 881 Pfam Phosphatase 4 regulatory subunit 3 167 356 IPR006887 -
Mtr4g4442 881 MobiDBLite consensus disorder prediction 661 772 - -
Mtr4g4442 881 Gene3D - 283 615 IPR011989 -
Mtr4g4442 881 MobiDBLite consensus disorder prediction 684 708 - -
Mtr4g4442 881 MobiDBLite consensus disorder prediction 721 768 - -
Mtr4g4442 881 PANTHER BINDING PROTEIN-RELATED 1 813 - -
Mtr4g4442 881 PANTHER ATP SYNTHASE GAMMA-RELATED 1 813 - -
Mtr4g4442 881 MobiDBLite consensus disorder prediction 789 881 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4442 Mtr-Chr4 58428618 58446512 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4442 K17491 - gmx:100786790 1375.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4442 4 58428618 58446512 Mtr4g4442 4 58428618 58446512 ECH
Mtr4g4442 4 58428618 58446512 Mtr2g1225 2 13277194 13293165 PCT