Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4384 ATGGCTATCATAACACATCTCACCGGAAAACGCCCTCATCACTGGCTCTCCGTTGATCACAACCGTCCCTCTCCCAATTCTCCAACATTCAAAAGACAGAAGTTATCAACAACTATGTCGAACAACACGCCACCACCGCTAACCACCAATGCCACTGTTTTCAGAATTTCTCGTTATCCCAAAACCAAACCACCTTTGCGTAGAGAAATTCATGCTCCGTGTAGTAGTAGACCACGCAAATTCGATTTATCAACTAATTTGAAATTAACAGAATCATCCAATTTGATGGCTAGTGATACCACCGATGAGTTAATGGAAAAATACGAGCATGCGAAACATGCTGCATTAGCTACTATCTCTTTTAGGGAAAAGGGAAAGGTAAAAGATAATATTAAGGAAGTTGTTGTTTTGAAAGATTCAAATGTCGAAGATGTAGAAGAATTTCTTTCTGTGGTGAAAGACCACAAGTTGAAGGAGAATGGTTTGGTTTGTTTGGATGATAAGGTTGAGGTTGTGAATGGTGGGATTCAGCAACAGTCAACTTCATCTATGGTTGATGCTGCAAAGATGTTGGATAATTTGTCTTTGAGTACGAAGAATGATCTTTCCGGTGTTTGTGCTTACAAGAAGTTGCTTGAGGCTGTTGATAAGCGAGGGGACACACTTGGTAGGTTGAAATTTGAAATTCAGCTTAATGAAAAGCGCAAGTCCGCGTTTGATTTGTTGCGTCCAAAGAAGGAATTAGTTGAGGAAGTGCCAAGGGAACCTTTTGTTCCTCTTACAAAAGAGGAAGAAGTTGAGGTTACGCGAGCCTTTTCTGCCAACCAGAATAAGGTCTTAGTTAATCATGAGAAATCCAATATTGAGATATCAGGCAAAATGTTTCGGTGCCTTAGGCCAGGTGAATGGTTAAACGATGAGGTGATAAATTTGTACCTTGAGTTGTTGAAAGAGAGGGAGAGAAGAGAGCCGCAGAAGTTTCTGAAATGTCATTTTTTCAATACCTTTTTCTATAAGAAGTTAATAAACAGCAAGAATGTTTATGATTACAAATCAGTGAGGAGATGGACTACTCAAAAGAAATTGGGATATGGCCTACATGAATGTGATAAAATATTTGTACCTATTCACCAGGGGACCCATTGGTGCTTAGCTGTTATCAATAAGAAGGAAAAGAAATTTCAGTATCTTGATTCACTGAAAGGAATTGACACAGAAGTGCTGGAAGTGCTGGCAAGGTATTTTGTAGATGAAGTGAAGGACAAGACTGGAGAAGATGTTGACATTAGTTCTTGGGAAACAGAATTTGTTGAAGACCTTCCTGAACAGATGAACGGGGATGATTGTGGGTTGTTTATGGTCAAATATGCTGACTTTTATAGCAGAAACTTGAGGCTCTGTTTCAACCAGGAACATATGCCTTACTTCCGGCTTAGAACAGCCAAGGAAATCCTGAGATTGAAAGCTGACTAA 1473 0.3965 MAIITHLTGKRPHHWLSVDHNRPSPNSPTFKRQKLSTTMSNNTPPPLTTNATVFRISRYPKTKPPLRREIHAPCSSRPRKFDLSTNLKLTESSNLMASDTTDELMEKYEHAKHAALATISFREKGKVKDNIKEVVVLKDSNVEDVEEFLSVVKDHKLKENGLVCLDDKVEVVNGGIQQQSTSSMVDAAKMLDNLSLSTKNDLSGVCAYKKLLEAVDKRGDTLGRLKFEIQLNEKRKSAFDLLRPKKELVEEVPREPFVPLTKEEEVEVTRAFSANQNKVLVNHEKSNIEISGKMFRCLRPGEWLNDEVINLYLELLKERERREPQKFLKCHFFNTFFYKKLINSKNVYDYKSVRRWTTQKKLGYGLHECDKIFVPIHQGTHWCLAVINKKEKKFQYLDSLKGIDTEVLEVLARYFVDEVKDKTGEDVDISSWETEFVEDLPEQMNGDDCGLFMVKYADFYSRNLRLCFNQEHMPYFRLRTAKEILRLKAD* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4384 490 Pfam Ulp1 protease family, C-terminal catalytic domain 302 484 IPR003653 GO:0006508|GO:0008234
Mtr4g4384 490 ProSiteProfiles Ubiquitin-like protease family profile. 288 460 IPR003653 GO:0006508|GO:0008234
Mtr4g4384 490 MobiDBLite consensus disorder prediction 19 49 - -
Mtr4g4384 490 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 185 489 - -
Mtr4g4384 490 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 31 171 - -
Mtr4g4384 490 MobiDBLite consensus disorder prediction 20 49 - -
Mtr4g4384 490 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 185 489 - -
Mtr4g4384 490 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 31 171 - -
Mtr4g4384 490 Gene3D Adenoviral Proteinase; Chain A 247 488 - -
Mtr4g4384 490 SUPERFAMILY Cysteine proteinases 256 488 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4384 Mtr-Chr4 57861051 57866874 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4384 K08592 - gmx:100797013 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4384 4 57861051 57866874 Mtr4g4384 4 57861051 57866874 ECH
Mtr4g4384 4 57861051 57866874 Mtr2g1311 2 14270329 14276095 PCT