Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4373 ATGAGTGATATTGAAGTGGCAGAGAAAAGCAACAGAAGGAGCAGTGTGTTCTTGGGTCATTGTCACATTATACTACTTTGGTACCCATCTTGGCTTGTTTCCTTTGTTTTCTTGGCATTTTCCTCTTCTCACTTTCATTTTGATTTCAAGTTTCCAATTCCCTCTCACTCTCCCAACCACTTCTCTCTAATGGATGCTACCTCACAACCTTTGAAGTATCAGACATGGTTCTTGAAGGTTTCTATCCACTGTGAAGGTTGTAGGAGGAAAGTAAAGAAAGTTCTTCAGAGCATTGATGGAGTTTTTACAACAACAATCGATCCACAACAGAATAAAGTAACAGTCACCGGAAATGTTGCTCTCGAGACTCTGATAAGGAAACTTGCCAAAGCTGGAAAACACGCCGAGGTTTTGCCGGAGAATCTTCCAGGGAAAGTAAAGGACTCCAACAAAGCTAAAAACAACAATAAGAGTGAACAAAAAAACCAAGAAACTCAGCAAAAGAAAGACCATTGTTCTGCAAATACTGAATCCAACCTCAACTCTGCCAAAGACAAGGGAATTGAAAATGCTGAGAAGTGTAACGGTAAAAGCAAGAGTACTAACACAAAAACCAGTGCTGGCTCACCGGAGAAATCTCCGGCTGGTGGTAAGGGGCAGGAAACAAAGAACAAGAGTGGTCAAAGTGGCGGAGGAGATTCTGGTAAGAAGAAGATGAAGAAAACTCAGAGTGGAACTGGAAGCAATGGGTTGAGTTCAGCATCTACCGGTGCACCTGCACACACTGGAGCAGAATTCCAGTGTCCAGGTCAGGTTGTGGGGCAAGTGAATCTCAGCCCTACACGTCAGCAATCGTACATGTTGTATCCAGAAACATGTTATCCTCCTTTGGTACAATATGCAACTTACAACAGATTATGTCCCATGGGAACAATGGGTTGTCCTTCTTACTATGTTCCACCATTACCCTACATGTGTGCAGGCCTTGATCGTGACCCTTATCAGTTTCAATCTACACCTTTGATTCCCTTTGAGTTCTTCAGTGATGAAAATGCAAATGGGTGTTCTATTATGTGA 1077 0.4262 MSDIEVAEKSNRRSSVFLGHCHIILLWYPSWLVSFVFLAFSSSHFHFDFKFPIPSHSPNHFSLMDATSQPLKYQTWFLKVSIHCEGCRRKVKKVLQSIDGVFTTTIDPQQNKVTVTGNVALETLIRKLAKAGKHAEVLPENLPGKVKDSNKAKNNNKSEQKNQETQQKKDHCSANTESNLNSAKDKGIENAEKCNGKSKSTNTKTSAGSPEKSPAGGKGQETKNKSGQSGGGDSGKKKMKKTQSGTGSNGLSSASTGAPAHTGAEFQCPGQVVGQVNLSPTRQQSYMLYPETCYPPLVQYATYNRLCPMGTMGCPSYYVPPLPYMCAGLDRDPYQFQSTPLIPFEFFSDENANGCSIM* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4373 358 CDD HMA 78 136 IPR006121 GO:0046872
Mtr4g4373 358 Gene3D - 72 137 - -
Mtr4g4373 358 ProSiteProfiles Heavy-metal-associated domain profile. 81 137 IPR006121 GO:0046872
Mtr4g4373 358 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 64 358 - -
Mtr4g4373 358 MobiDBLite consensus disorder prediction 146 171 - -
Mtr4g4373 358 MobiDBLite consensus disorder prediction 132 263 - -
Mtr4g4373 358 Pfam Heavy-metal-associated domain 80 134 IPR006121 GO:0046872
Mtr4g4373 358 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 64 358 - -
Mtr4g4373 358 MobiDBLite consensus disorder prediction 194 210 - -
Mtr4g4373 358 SUPERFAMILY HMA, heavy metal-associated domain 72 138 IPR036163 GO:0046872
Mtr4g4373 358 Coils Coil 155 175 - -
Mtr4g4373 358 MobiDBLite consensus disorder prediction 241 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4373 Mtr-Chr4 57788726 57790643 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4373 - - mtr:MTR_4g119820 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4373 4 57788726 57790643 Mtr2g1321 2 14387261 14388829 PCT