Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4370 ATGGAGGAACCCAGCCAACTGAATCGTGCCATCATTGATTCTTCTGCTGGGGCAATTTCTGGTGGAATTTCTCGTACTGTAACATCACCTCTTGATGTTATTAAGATTAGATTTCAGGTTCAACTTGAACCAACATCTTCATGGGCTTTACTGCAAAAAGATTTGGTCTCCTCCGCGCCATCGAAATATACTGGTATGCTTCAAGCTACCAAAGATATTCTTAGAGAAGAAGGTTTAAAGGGATTTTGGCGAGGCAATGTACCGGCGTTGCTCATGGTTATGCCATATACAGCCATTCAATTTACAGTTTTACACAAGTTGAAGACTTTTGCATCTGGTTCTTCTAAGTCAGAGAATCACACTAATTTGAGCCCTTATCTATCCTATGTCAGTGGTGCGCTAGCCGGGTGTGCAGCTACTGTTGGTTCATATCCTTTTGATCTTCTCAGAACCATATTAGCTTCTCAAGGCGAGCCAAAGGTATATCCTAACATGAGGTCAGCATTCGTCGATATCATCCAGACTCGAGGATTTCAAGGCATGTATGCTGGATTGTCTCCAACTCTAGTTGAGATTATACCTTATGCAGGACTACAATTTGGAACCTATGATACATTTAAGCGTTGGGCCTCGGCTTGGAACCATAATAGATTTTCCAATACCACCGGAGAAGATAATATTTCTAGTTTTCAGCTTTTCATTTGTGGATTGGCGGCTGGAACATGTGCCAAACTTGTTTGTCATCCTCTTGATGTTGTCAAGAAAAGGTTTCAGATCGAAGGACTTCAAAGGCATCCCAGATACGGAGCTCGAGTTGAGCATCGAGCATACAGTAATATGTACGATGCCGTGCAACGGATATTTCGGTCAGAGGGTTGGGCTGGACTATACAAGGGGATAATTCCATCAACTATTAAAGCTGCACCTGCCGGTGCAGTGACATTTGTAGCATATGAAACAGTGTCAGATTGGCTAGAGTCCTTGAATTGA 990 0.4273 MEEPSQLNRAIIDSSAGAISGGISRTVTSPLDVIKIRFQVQLEPTSSWALLQKDLVSSAPSKYTGMLQATKDILREEGLKGFWRGNVPALLMVMPYTAIQFTVLHKLKTFASGSSKSENHTNLSPYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPNMRSAFVDIIQTRGFQGMYAGLSPTLVEIIPYAGLQFGTYDTFKRWASAWNHNRFSNTTGEDNISSFQLFICGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHRAYSNMYDAVQRIFRSEGWAGLYKGIIPSTIKAAPAGAVTFVAYETVSDWLESLN* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4370 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 110 IPR018108 -
Mtr4g4370 329 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 3 327 - -
Mtr4g4370 329 SUPERFAMILY Mitochondrial carrier 10 320 IPR023395 -
Mtr4g4370 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 227 324 IPR018108 -
Mtr4g4370 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 209 IPR018108 -
Mtr4g4370 329 Gene3D Mitochondrial carrier domain 6 327 IPR023395 -
Mtr4g4370 329 PRINTS Mitochondrial carrier protein signature 13 26 IPR002067 GO:0055085
Mtr4g4370 329 PRINTS Mitochondrial carrier protein signature 26 40 IPR002067 GO:0055085
Mtr4g4370 329 PRINTS Mitochondrial carrier protein signature 85 105 IPR002067 GO:0055085
Mtr4g4370 329 PRINTS Mitochondrial carrier protein signature 138 156 IPR002067 GO:0055085
Mtr4g4370 329 PRINTS Mitochondrial carrier protein signature 182 200 IPR002067 GO:0055085
Mtr4g4370 329 PRINTS Mitochondrial carrier protein signature 236 258 IPR002067 GO:0055085
Mtr4g4370 329 PANTHER SOLUTE CARRIER FAMILY 25 3 327 - -
Mtr4g4370 329 Pfam Mitochondrial carrier protein 14 111 IPR018108 -
Mtr4g4370 329 Pfam Mitochondrial carrier protein 227 326 IPR018108 -
Mtr4g4370 329 Pfam Mitochondrial carrier protein 123 209 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4370 Mtr-Chr4 57749830 57755772 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4370 1 327 Organic Solute Cotransporters AT3G21390 74.018 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4370 K15108 - gmx:100784986 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4370 4 57749830 57755772 Mtr2g1326 2 14448900 14454708 PCT