Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4178 ATGAACTATTGTGAGACAAATTGTGTTGTCAAGAGGAACAAAGGTAAAGAAACTGATGAAACCTTGTCTTTTACACAGTCCAAGGATAATATAAAGATGTCGCATGATCGGAACAAAGGAAAACAACAACGTTACTCTCTTGTCTCGTTTATGGAACTACCGAATTATATGAAGGATAATGAATATATTTTACGTTATTATAGAGCCAATTGGCCTTTGAAAGAAGCTTTCTTCAGTCTCTTTCGTTGGCATAATGAAACTTTGAATGTTTGGACACATTTAGTTGGATTTATTCTGTTCCTTGGGTTGACCTTGGCCAATTTGATGAAGCCTCATGTGGTGGATCTCTTACAACAATTTACAAGGTCTATCTCTTCAGGTGGTGAAAAAAATGTTTCTGATAGCATCAAAGTCTTGGGAACGGCGTTACTCTTTGATTTAAACCATCAATTACCATTGACAATGGAAGTTGAATCCTTGGAATTTGTTATAGCAAGGTGGCCATTCTTTGTCTTCTTAGGTGGTTCAATGTTCTGTCTCCTCTCTAGCAGCATTTGTCACCTATTTTCATGTCACTCCCATGACTTAAACCTGTTTCTGTTAAGAATAGATTATGTCGGAATCGCTGTCATGATCATAACCTCATTCTTCCCTCAAATTTACTATGTTTTCCTATGTCAACCTCATTGGCAACTCATCTACCTAGCCGGTATTACAGCCATGGGACTATTCACCATAGTAACATTGCTTTCCCCATCACTTTCTACCGGTAAACACCGCGCTTTTCGAGCTATGCTGTTCTGTTCAATGGGACTTTTCGGCATTGTACCTGCAGTTCATGCTTGTGTTGCGAATTGGGGAAATCCTCGGCGCAATGTTACACTAGCATATGAATGTGTCATGGCATTGTCTTACTTGATAGGGACTTTGTTCTATGTGACGCGGATACCGGAAAGATGGAGGCCTGGTTGGTTTGATTTAGCAGGACATAGTCATCAAATATTTCATATTTTGGTTGTGGTTGGTGCATTATCACATTATGCAGCTACTCTTAAAATGCTTGAATGGCGTGACACTTTTGGGTGTGACAAGGCTTAA 1098 0.3934 MNYCETNCVVKRNKGKETDETLSFTQSKDNIKMSHDRNKGKQQRYSLVSFMELPNYMKDNEYILRYYRANWPLKEAFFSLFRWHNETLNVWTHLVGFILFLGLTLANLMKPHVVDLLQQFTRSISSGGEKNVSDSIKVLGTALLFDLNHQLPLTMEVESLEFVIARWPFFVFLGGSMFCLLSSSICHLFSCHSHDLNLFLLRIDYVGIAVMIITSFFPQIYYVFLCQPHWQLIYLAGITAMGLFTIVTLLSPSLSTGKHRAFRAMLFCSMGLFGIVPAVHACVANWGNPRRNVTLAYECVMALSYLIGTLFYVTRIPERWRPGWFDLAGHSHQIFHILVVVGALSHYAATLKMLEWRDTFGCDKA* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4178 365 Pfam Haemolysin-III related 81 347 IPR004254 GO:0016021
Mtr4g4178 365 PANTHER HEPTAHELICAL TRANSMEMBRANE PROTEIN 1 25 363 - -
Mtr4g4178 365 PANTHER ADIPOR/PROGESTIN RECEPTOR-RELATED 25 363 IPR004254 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4178 Mtr-Chr4 55854880 55857843 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4178 K07297 - gmx:100799310 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4178 4 55854880 55857843 Mtr4g4178 4 55854880 55857843 ECH
Mtr4g4178 4 55854880 55857843 Mtr2g1927 2 25087403 25094230 PCT