Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4093 ATGGGAGTAGATAGTGCTGCGTCTTCTAGCTCCAATTCATGGTCACATAATGATGAAGATGATAACAGTAGCAAAAACAACAGCAGTATTGTGGTGTTGAATGTCTATGATCTTACCCCTATTAATAATTACATGTATTGGTTTGGATTTGGAATCTTTCACTCCGGCATTGAAGTGTATGGTAAGGAGTATGGATTTGGGGCCCATGACTTCCCAGCTAGTGGAGTTTTTGAAGTGGAGCCAAAGAATTGCCCTGGATTCATATATAGGTGTTCCATCAATTTGGGCCAAATACAGACAAGCCCTTCAGAATTCCGGACATTTATCGAAAACATGGCTTCAGAGTATCATGGTGACACCTATCATCTTATATCTAAGAACTGCAATCATTTTACGGATGATGTCTCATATAGATTGATTGGAAAACAAATCCCAGGTTGGGTGAATCGGCTTGCTAAGCTTGGTGCTTTGTGCAGCTGTCTACTTCCTGAAAGTCTTCAAGTAACAAGTGTTAAACAGCTACCGGAATACCATGAATGCTCGGAAGATGAATTTGTCGACTCTCTCTCAACTGCCACACCCCACGGATCACCAGAAATAGACGCTGAGCAAGAAAAACACCTTCTGTCACCATCAGCTCGTGCTGAGGATGTAACTTTCGTTAAAGAGGCCCACGTAAAGTGA 684 0.4211 MGVDSAASSSSNSWSHNDEDDNSSKNNSSIVVLNVYDLTPINNYMYWFGFGIFHSGIEVYGKEYGFGAHDFPASGVFEVEPKNCPGFIYRCSINLGQIQTSPSEFRTFIENMASEYHGDTYHLISKNCNHFTDDVSYRLIGKQIPGWVNRLAKLGALCSCLLPESLQVTSVKQLPEYHECSEDEFVDSLSTATPHGSPEIDAEQEKHLLSPSARAEDVTFVKEAHVK* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4093 227 MobiDBLite consensus disorder prediction 1 25 - -
Mtr4g4093 227 Gene3D PPPDE domains 24 179 IPR042266 -
Mtr4g4093 227 ProSiteProfiles PPPDE domain profile. 29 166 IPR008580 GO:0008233
Mtr4g4093 227 SMART DUF862_2a 29 167 IPR008580 GO:0008233
Mtr4g4093 227 MobiDBLite consensus disorder prediction 1 17 - -
Mtr4g4093 227 PANTHER DESUMOYLATING ISOPEPTIDASE 2 227 IPR008580 GO:0008233
Mtr4g4093 227 Pfam PPPDE putative peptidase domain 31 163 IPR008580 GO:0008233
Mtr4g4093 227 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 2 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4093 Mtr-Chr4 54903536 54908882 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4093 K22763 - gmx:100778961 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4093 4 54903536 54908882 Mtr4g4093 4 54903536 54908882 ECH
Mtr4g4093 4 54903536 54908882 Mtr2g1998 2 28981367 28985083 PCT