Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4064 ATGGTGGCCGCTGCCGCTGCTTTTTTCCCTGTTACTTCATCCTTGCCGGACTCTGGTGGCAACAAAATTGGGGCTGGGAATGCGAACCTTGGAGGGCTTAAATCTAAACATGTGTCTGCGGGCTTGCAAGTAAAGGCAAATGCCCATGCCCCTCCCAAGATTAATGGAACCAAAGTTTCTACATCTGTAGAAAACTATAAGCATGAGGATGTTTTGCCGTCGTCGCAATCCTCTAGGACTTTTATCAACCAGTTACCTGACTGGAGCATGCTTCTTGCTGCTATAACAACGATTTTCTTGGCAGCTGAAAAACAGTGGATGATGCTCGATTGGAAGCCAAGACGGTCTGACATGCTGATTGACCCTTTTGGTATAGGCAAAATTGTTCAGGATGGTCTTGTGTTCAGTGAAAACTTTTCTATCAGATCGTATGAAATTGGTGCGGATCGAACGGCGTCTATAGATACAATAATGAATCATTTGCAGGAAACTGCACTTAATCATGTTAAAACTGCGGGGCTTCTTGGCGATGGCTTTGGTTCTACGCCTGAAATGTGCAAAAAAAACTTAATATGGGTAGTTGCGCGGATGCAAGTTGTCGTTGATCGTTATCCTACGTGGGGAGATGTTGTTCATGTAGAAACTTGGGTTTCTGCATCGGGCAAGAATGGTATGCGTCGTGATTGGCTTTTACGTGATTATAATACTGGTGAAATCTTGACGAGAGCCTCCAGTGTTTGGGTCATGATGAATAAACATACCAGAAAGCTGTCCAAAATTCCGGAAGAAGTCAGAGGAGAGATAGGTTCTTATTTTGTGGAATCTGCACCAATTCTGGAAGAAGATGACAGAAAACTGGCTAAACTTGATGACAGCACAGCGGATTATATCCGCTCGGGTTTAAGTCCTAGATGGAGTGATCTAGATGTCAATCAGCATGTTAACAATGTGAAGTACATTGGCTGGATTCTGGAGAGTGCTCCACAGTCAATCCTCGAGAGTCACGAGCTTTGTGCTATGACTTTGGAGTATAGGAGGGAGTGTGGCAAGGACAGTGTGCTCCAGTCCCTAACTTCTGTATATGATGCTGGTGTTGGTAATCTAGCTCAAAGCGGCCGGATTGAGTGCCAGCATTTGCTTCGACTTGAAGATGGGGCTGAAATTGTGAGGGGTAGAACTAAGTGGAGGCCCAAACCTGTGAACCACTTTGATATTGCGAATCAGGTTCCAGCAGGAAGCACCTAA 1245 0.4514 MVAAAAAFFPVTSSLPDSGGNKIGAGNANLGGLKSKHVSAGLQVKANAHAPPKINGTKVSTSVENYKHEDVLPSSQSSRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRSDMLIDPFGIGKIVQDGLVFSENFSIRSYEIGADRTASIDTIMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVARMQVVVDRYPTWGDVVHVETWVSASGKNGMRRDWLLRDYNTGEILTRASSVWVMMNKHTRKLSKIPEEVRGEIGSYFVESAPILEEDDRKLAKLDDSTADYIRSGLSPRWSDLDVNQHVNNVKYIGWILESAPQSILESHELCAMTLEYRRECGKDSVLQSLTSVYDAGVGNLAQSGRIECQHLLRLEDGAEIVRGRTKWRPKPVNHFDIANQVPAGST* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4064 414 CDD 4HBT 135 251 - -
Mtr4g4064 414 Pfam Acyl-ACP thioesterase 132 396 IPR002864 GO:0006633|GO:0016790
Mtr4g4064 414 PANTHER PALMITOYL-ACYL CARRIER PROTEIN THIOESTERASE, CHLOROPLASTIC 3 402 - -
Mtr4g4064 414 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 129 281 IPR029069 -
Mtr4g4064 414 Gene3D Hotdog Thioesterase 125 402 - -
Mtr4g4064 414 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 3 402 IPR045023 GO:0006633|GO:0016297
Mtr4g4064 414 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 296 402 IPR029069 -
Mtr4g4064 414 Pfam Acyl-ATP thioesterase 3 121 IPR021113 GO:0016790
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4064 Mtr-Chr4 54510662 54515603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4064 16 398 Acyl Lipid Metabolism Gene Families AT1G08510 76.364 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4064 K10781 - gmx:100170693 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4064 4 54510662 54515603 Mtr4g4064 4 54510662 54515603 ECH