Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4059 ATGAAAGCTACTATTAATCAAGCTGATGAACTCGATGCTGCTGAGGCTATGCCACCGCCTAATTCCAAAAGGGTCAGGGTCAAAAAAGAACTAACTTTTCAAGATATGTATCAAAACCAAGACTTGTTTGATCAGGATGATGATGAGGACGATGATTGGGACCCTTCTCAGAAGCAAGCTGATGATGGAGTTGCTCAGACTGCTGTTTCCGATTCCATCCATGAAGTTTCAGAAGCCAATCCACAGCCTAATGCTAAAAGGGTTAAGGTGCAAAAGGAACTAACTTTTCAGGACCTGTATCAAAGCCAAGAGTTGTTTGACGAGGATGATGAGGAGGACGATGATTGGGACCCAACTCAGTTGCAGAAGTGTCTCGAAGTCATCAAGTGGTTCTGTAAAAATTGTACTATGGATAACCTAAACAATGATGTCTGTTGTCAAATATGTGGGGAGCATAAAGATTCTAAAATCCTGAGCCGTGGGCATTTTGCATCTCGCTTTGCACAAGATGAAGATCCAAATGAGATCCAGCCAAGTATAAAAAGACTGAAAGATGTTGACTCACTGGAATCTGCAGCAAACAGTTCTACGGCAATTGGCTTTGATGAAAGAATGTTGTTACATGCAGAAGTTGAAATGAAATCACGTCCACACCCCGAAAGGCCAGATCGACTTCGAGCAATTGCTGCTAGTCTTGCCAGAGCTGGTATATTTCCAGGAAGATGCCATTCAATTCCTGCTAGAGAAATCACTCAAGAAGAACTGATGATGGTTCATTCTTCGGAGCATATTGAATCTGTGGAAGTTACAAGCAAGTTAATGTCTAGTTATTTTACTTCCGACACATACGCCAATGAGCATTCAGCATGTGCTGCTAGGTTGGCAGCTGGGTTATGTGCCGATCTAGCATCGGCAGTTGTTTCTGGGCGTGCCAAAAATGGATTTGCTTTGGTTAGACCTCCTGGTCATCATGCCGGTGTAAAAGATGTGATGGGGTTTTGCCTTCACAATAATGCCGCAGTGGCAGCATTGGCAGCTCAGGCTGCAGGGGCTAGGAAGGTGCTAATTTTAGATTGGGATGTTCATCACGGAAATGGCACACAGGAAATATTTGAGCAAAACAAATCAGTCTTGTATATATCATTGCATAGACATGAGGATGGAACATTTTATCCCGGTACTGGAGGTGCTCATGAGGTTGGTTATATGGGTGCAGAAGGTTACTGTGTGAATATTCCATGGAGTCGAGGTGGTGTTGGTGATAATGATTACATTTTTGCATTTCAGAATGTTGTACTTCCTATAGCTTCTGAATTCGCTCCAGATTTTACCATAATATCAGCAGGATTTGATGCTGCTAGAGGTGATCCCCTTGGAGGTTGTGATATTACTCCCTCTGGCTATGCACAGATGACGCACATGTTGAATGCCCTTTCTGGTGGAAAAATGCTTGTTATTCTTGAGGGGGGCTATAATCTTCGTTCCATATCATCTTCTGCAACTTCAGTAATCAAGGTATTACTGGGTGAGAGTCCTGTATGTGAACTGGAAAATAGTTTCCCTACCAAATCTGGCCTCCAAACTGTTTTCGAAGTCCTCGACATTCAAAATAATTTTTGGCCTTCCTTGAAACCTATCTTTAAAAATGTGATGTCACTTTGGGAAATGCAATGTCTTGGGAAAAAAGGCAAACAGACAAAAAAGAGACGCCGAATTTTGGCACCAATGTGGTGGAGGTGGAGTCGCAGAAGTTTCTTATTCCATATGCTGAACGGCCATCGTCGTGTAAAATCAAAATGA 1800 0.4261 MKATINQADELDAAEAMPPPNSKRVRVKKELTFQDMYQNQDLFDQDDDEDDDWDPSQKQADDGVAQTAVSDSIHEVSEANPQPNAKRVKVQKELTFQDLYQSQELFDEDDEEDDDWDPTQLQKCLEVIKWFCKNCTMDNLNNDVCCQICGEHKDSKILSRGHFASRFAQDEDPNEIQPSIKRLKDVDSLESAANSSTAIGFDERMLLHAEVEMKSRPHPERPDRLRAIAASLARAGIFPGRCHSIPAREITQEELMMVHSSEHIESVEVTSKLMSSYFTSDTYANEHSACAARLAAGLCADLASAVVSGRAKNGFALVRPPGHHAGVKDVMGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEDGTFYPGTGGAHEVGYMGAEGYCVNIPWSRGGVGDNDYIFAFQNVVLPIASEFAPDFTIISAGFDAARGDPLGGCDITPSGYAQMTHMLNALSGGKMLVILEGGYNLRSISSSATSVIKVLLGESPVCELENSFPTKSGLQTVFEVLDIQNNFWPSLKPIFKNVMSLWEMQCLGKKGKQTKKRRRILAPMWWRWSRRSFLFHMLNGHRRVKSK* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4059 599 MobiDBLite consensus disorder prediction 1 67 - -
Mtr4g4059 599 PANTHER HISTONE DEACETYLASE-RELATED 49 598 - -
Mtr4g4059 599 ProSitePatterns Zinc finger RanBP2-type signature. 130 149 IPR001876 -
Mtr4g4059 599 Gene3D Histone deacetylase domain 190 567 IPR037138 -
Mtr4g4059 599 MobiDBLite consensus disorder prediction 41 56 - -
Mtr4g4059 599 PANTHER HISTONE DEACETYLASE 49 598 - -
Mtr4g4059 599 SUPERFAMILY Arginase/deacetylase 194 536 IPR023696 -
Mtr4g4059 599 PRINTS Histone deacetylase superfamily signature 320 343 IPR000286 -
Mtr4g4059 599 PRINTS Histone deacetylase superfamily signature 353 368 IPR000286 -
Mtr4g4059 599 PRINTS Histone deacetylase superfamily signature 441 451 IPR000286 -
Mtr4g4059 599 Pfam Histone deacetylase domain 218 506 IPR023801 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4059 Mtr-Chr4 54439252 54449474 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4059 - - mtr:MTR_4g111985 1067.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4059 4 54439252 54449474 Mtr4g4059 4 54439252 54449474 ECH