Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4054 ATGGCGAAACCTCGCAAGCCCAAGCCCGAAGACCCAAAGCCAGAAAACTCCGGCGCCGTCGTTCAACACCAAAAGCTCTGTCTCTCAATCGACATGGATAAACGCTTAGTTTACGGGTACACTGAATTGAAAATTGCGGTACCTGAAATTGGGATAGTAGGTTTACATGCGGAGAATTTAGGGATTGAGAGTGTATGGGTTGATGGTGAACCTACGGAGTTTGAGTATTATCCTCATCAGTATTCTCAGAACGACGATGAAAAGAGATGGAGTTCGGTTACTTCACCTAGCTCTGCTGCTGATGCTGCTGTGTCAGTGTATTTGTCTTCTTTGGAGAAGGAGCTTGTGCCAAATTTGTTAATTAATTGCTTTAAACCTTCCAAGACTGAAACTGAACAACAGCAGAAGGAGCAACCTGTTACTGAAAATGGGTTTCATTCCGCAGCCGCTGCCGAGCCTCTTAAGCAGAATGTGAGACTGGTTCGCATTAACTATAGCATAGAAAAGGCAGAGACGGGAGTTCACTTCAGAGACAGTGTTCTTCACACCGATAATCAGATAAGGAGGGCAAGGTGTTGGTTCCCCTGTATAGATGACAATATACAGCAATGCTGCTATGACTTGGAGTTCACTGTAGCACATAACCTTGTGGCTGTCAGTACTGGAAGCTTGTTGTACCAGGTCTTAAGCAAGGACAATCCTCCTCGGAAAACATATGTCTATAAATTAGATGTTCCAGTTTCTGCAAGGTGGATATCATTGGCTGTTGCCCCGTTTGAAGTTCTGCCCGATCACCAATTTGGCCTCATATCACATATGTGTTTGCCACCTAATCTGGCTAAAATGCGGCATACAGTGGAGTTCTTCCATAGCGCCTTCAGCTGCTATAAGGATTATCTTTCTGTAGATTTCCCATTTGACTCATATACACAAGTCTTTGTAGAGCCTGAGATGGTAGTTTCATCATTGAGTTTAGGAGCCTCTATGAGTATCTTTAGTTCTCAAGTTTTGTATGATGAGAAGGTTATTGACCAGACTATTGATACTAGGGTAAAACTTGCTTACGCCCTTGCAAGACAGTGGTTTGGTGTATATATTACTCTGGAGTCAACAAATGATGAGTGGCTCTTGGAAGGGCTAGCTGGTTGCTTGGCAGATTTTTTTATTAAGAAGCATTTGGGTAATAATGAGGCACGATACTAGAGATACAAGGCAAATTGTGCTGTTTGCAAAGCTGATGATAGTGGAGCAACAATTTTGAGCTGTCCAGCTTCGTGTAAGGATTTATATGGAACACAGTGCATTGGTTTATACGGAAGAATAAGAGCATGGAAGTCTGTGGCAGTTGTTCAGATGTTGGAAAAGCAAATGGGATCTGATTACATGCAAATTTTGCAAGCTATAGTTACTCGGGCTCAAGATAAAACACGTTCCGTAAAAACACTTAGTACTAAGGAGTTTCGACATTTTGCTAACAAGGTTGGGAATCTTGAACGTCCTTTTCTTAAAGATTTCTTCCCCCGTTGGGTCAGTTCTTGTGGATGTCCTGATTTAAGAATGGGGTTTTCCTATAACAAACGAAAGAATATCGTTGAATTAGCTGTGTTGAGAGGATGCACAGCATTGCAGACTTCAAGTACAGCCGTTCTTGATATTAATCCAGATAGTGAAAATCGAGACGGAGATTCTGGCTGGCCTGGTATGATGAGTATCCGGGTGTATGAACTTGATGGTATGTATGACCATCCTATTCTACCGATGGCTGGAGAAGCATGGCAGCTTTTGGAAATTCAATGCCACTCAAGGCTTGCTGCTAGACGGCTTCCAAAATCAAAGAAAGGTGTAAAACATGATGGCTCTGATGACAACGGCGACGTGCCTCCAGTGGATACTCGCTCCAGTACCGAGTCCCCTTTATTATGGATCAGAGCAGATCCTGACATGGAGTACCTCGCTGAAGTTCATTTTAATTAACCAGTTCAGATGTGGATTAACCAATTAGAGAAGGACAAAGATGTTATTGCTCAAGCACAAGCAATTGCAGCCCTTGAGGCCTCACCCCAGCTATCATTTTCTGTTGTAAATGCCCTGAACGGTTTTCTTACCGACTCCAAGGCTTTCTGGAGAGTAAGAATCGAAGCAGCATTTGCATTGGCAAATTTAGCATCCAAGGAAACTGATTTTTCTGGTCTACTCCATTTGGTGAAATTTTACAAGAGTCGAAGATTTGATCCTGACATTGGACTCCCAAAGCCAAATGATTTTCACGATTTTGCCGAGTATTTCGTTCTTGAGGCCATTCCACACGCTGTAGCTACGATTAGAGCCGCTGACAAGAAAAGTCCAAGAGAAGCTATCGAATTTGTTTTACAGCTATTGAAGTACAATGACAACACTGGGAACCCTTACTCAGATGTGTTTTGGCTTGCTGCATTGGTCCAATCAATTGGCGAGTTTGAGTTTGGGCAACAGAGTATTCTCCTATTGTCATCACTCCTCAAGCGCATTGACCGGCTTTTACAATTTGATAGTCTCATGCCAAGCTACAATGGAGTCTTGACCGTCGGTTGTATACGGACGTTGGCCCAGATTGCCCTAAAGCTTGCAGGATTCATTCCTCTTGATTGCGTATATGAACTTGTAAAGCCTTTTCGAGACCAAAAAGCGATTTGGCAAGTTCGAATTGAAGCAAGCAGAGCACTCCTTGATCTCGAATTCCACTGCAAGGGCATTGATTCCGCACTTCTTTTATTTACCAAATATGTTGAGGAGGAGCCTTCCTTAAGAGGCAAGTTAAAACTGGCCACCCATGTTATGAAGCTATGCCAGATGAGAGATGGTTTGAATTCAAATGATGAAATTACAAGCCAAACTCTTGTCTCGTTGCTAAGTTTACTGGAAGGGCGTATGGCATTTAACAATGTCTTTCTTCGTCATTATTTATTCTGCATATTACAAATACTGGCAAAAAGACCCCCAACTCTACATGGAATTCCCAGAGAAAGTAGAACATTACATATGAGTCTTACGGGTGCATCTAACTATCAGAGGAACCTATTTGTTATTGATTCCGACAGTAAACCTTTGGAACTGCCAAGTTCCACCCAAAACCTTACACAAGATTTGATCATAACTGAAGGTTTAAGGGATGCACTTAATGAAGCTCCTAAGGACCAAACTGTTGAAGCTCCCAAAGAAGTACATGTCGAAGTTCTAAAGGATGTGCCCCTGGAGACTTCCAAAGAGGACTTAACAGGATTGCCCCCTGAAGCACCAATTGAAGCTCCCAATGAAATTTCCAAGGAAACAGATACTGTATCCAATAGCCATGAAAGAAAAAGGCTATTCAAAATCAAGGTTAAACAATCTTCTGCCACCAGTAGGGCTGATACTGATAATCAACTGCTTGAACGTTCTTTAGGTGGTCGTAATGAAACTGATCACGGAGCTAGCAGTTCAGTTTCAGTAGATGCACCTCAGAGGAATTTTGCCGAGACTGTTAGCATTAGTAATCATAATATTGAGGAAGTTAATTCTTGTTACAATCCTGGTTCCCGCATGACTGCCAGCATCGGTAGTGCAAAGATTTTGAGTGATGGTGATGAATTGGTCAAAGAACTCCAATGCACTGCCGATTCAAGTGTAGTTTACTCTCAAGTTCAGCCTGAAGATCCTTCACCGTCTAGTATTATTCAAGATAACAATATAGATGCTGATGCACGACGATTTGCCAGCCTTCAAACACTTTCAGTTACTAGATTTGATCAAGCTGGAGAATCATGTGGCAAAGAAGTTCCTGCTCGCGGGAAACATAAACACAAAGATAAGGATAAGAAACGTAAACGCGAAAGTCACAAGGGACAGCAAAATGACCCAGAATATTTGGAGCGAAAACGATTGAAGAAAGAGAAAAAACGGAAGGAAAAAGAATTGGCAAAACTGCTAAGTAATGAAGCAAAAAGATCCTCCATAGACTTGTCATGTAAGAAAGAGGAGCCTGAAGTTAATGATGCAAAACAGCTGAAATCTGTTGAACCCAGTTGTTATAATTCTGTATCAGAAATCGGAAGGGTTGATCCCAAACCGGTGCCACCCGAAGGTACATCAGGTGCACCCAAAATTCGAATTAAAATTAAAAATCGAATGCTCAGCAAGTCGTAG 4161 0.4215 MAKPRKPKPEDPKPENSGAVVQHQKLCLSIDMDKRLVYGYTELKIAVPEIGIVGLHAENLGIESVWVDGEPTEFEYYPHQYSQNDDEKRWSSVTSPSSAADAAVSVYLSSLEKELVPNLLINCFKPSKTETEQQQKEQPVTENGFHSAAAAEPLKQNVRLVRINYSIEKAETGVHFRDSVLHTDNQIRRARCWFPCIDDNIQQCCYDLEFTVAHNLVAVSTGSLLYQVLSKDNPPRKTYVYKLDVPVSARWISLAVAPFEVLPDHQFGLISHMCLPPNLAKMRHTVEFFHSAFSCYKDYLSVDFPFDSYTQVFVEPEMVVSSLSLGASMSIFSSQVLYDEKVIDQTIDTRVKLAYALARQWFGVYITLESTNDEWLLEGLAGCLADFFIKKHLGNNEARY*RYKANCAVCKADDSGATILSCPASCKDLYGTQCIGLYGRIRAWKSVAVVQMLEKQMGSDYMQILQAIVTRAQDKTRSVKTLSTKEFRHFANKVGNLERPFLKDFFPRWVSSCGCPDLRMGFSYNKRKNIVELAVLRGCTALQTSSTAVLDINPDSENRDGDSGWPGMMSIRVYELDGMYDHPILPMAGEAWQLLEIQCHSRLAARRLPKSKKGVKHDGSDDNGDVPPVDTRSSTESPLLWIRADPDMEYLAEVHFN*PVQMWINQLEKDKDVIAQAQAIAALEASPQLSFSVVNALNGFLTDSKAFWRVRIEAAFALANLASKETDFSGLLHLVKFYKSRRFDPDIGLPKPNDFHDFAEYFVLEAIPHAVATIRAADKKSPREAIEFVLQLLKYNDNTGNPYSDVFWLAALVQSIGEFEFGQQSILLLSSLLKRIDRLLQFDSLMPSYNGVLTVGCIRTLAQIALKLAGFIPLDCVYELVKPFRDQKAIWQVRIEASRALLDLEFHCKGIDSALLLFTKYVEEEPSLRGKLKLATHVMKLCQMRDGLNSNDEITSQTLVSLLSLLEGRMAFNNVFLRHYLFCILQILAKRPPTLHGIPRESRTLHMSLTGASNYQRNLFVIDSDSKPLELPSSTQNLTQDLIITEGLRDALNEAPKDQTVEAPKEVHVEVLKDVPLETSKEDLTGLPPEAPIEAPNEISKETDTVSNSHERKRLFKIKVKQSSATSRADTDNQLLERSLGGRNETDHGASSSVSVDAPQRNFAETVSISNHNIEEVNSCYNPGSRMTASIGSAKILSDGDELVKELQCTADSSVVYSQVQPEDPSPSSIIQDNNIDADARRFASLQTLSVTRFDQAGESCGKEVPARGKHKHKDKDKKRKRESHKGQQNDPEYLERKRLKKEKKRKEKELAKLLSNEAKRSSIDLSCKKEEPEVNDAKQLKSVEPSCYNSVSEIGRVDPKPVPPEGTSGAPKIRIKIKNRMLSKS* 1387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4054 1384 MobiDBLite consensus disorder prediction 1257 1314 - -
Mtr4g4054 1384 MobiDBLite consensus disorder prediction 1280 1297 - -
Mtr4g4054 1384 MobiDBLite consensus disorder prediction 1 20 - -
Mtr4g4054 1384 CDD M1_like_TAF2 21 509 - -
Mtr4g4054 1384 MobiDBLite consensus disorder prediction 1118 1157 - -
Mtr4g4054 1384 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 17 257 IPR042097 -
Mtr4g4054 1384 MobiDBLite consensus disorder prediction 1079 1157 - -
Mtr4g4054 1384 Pfam Peptidase family M1 domain 287 481 IPR014782 GO:0008237|GO:0008270
Mtr4g4054 1384 MobiDBLite consensus disorder prediction 607 632 - -
Mtr4g4054 1384 Gene3D tricorn interacting facor f3 domain 19 256 IPR042097 -
Mtr4g4054 1384 Gene3D Neutral Protease Domain 2 268 513 IPR027268 -
Mtr4g4054 1384 SUPERFAMILY ARM repeat 458 991 IPR016024 -
Mtr4g4054 1384 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 19 1316 IPR037813 GO:0005669
Mtr4g4054 1384 Gene3D - 652 912 IPR011989 -
Mtr4g4054 1384 MobiDBLite consensus disorder prediction 1345 1371 - -
Mtr4g4054 1384 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 271 517 - -
Mtr4g4054 1384 Coils Coil 1295 1315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4054 Mtr-Chr4 54360702 54375378 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4054 K03128 - gmx:100803129 2234.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4054 4 54360702 54375378 Mtr4g4054 4 54360702 54375378 ECH