Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4042 ATGGACTGGGGTGTTAATAGTAACAACAATCACTACAGAACTTACAAAGAAGATCATAGTAATATTAATAAATCCATGATGGATTTGGAACTCATTTCAAACATGGATGGCCATGGCCTTGCTTCTTCAGAAAACCAACCAATTCCTGTTACTTCACCACTCAAACCAAGAAAGAAAACTATGACTTCTGTTTATTTGAAGTTCTTTGAGACTGCTGCTGATGGAAAGACTAGGAGATGCAAGTTTTGTGGACAGACCTATTCTATTGCAACTGCCACAGGCAATTTGGGGAGGCATCTTGCAAATCGCCATCCGGGATACGATAAGACAGGGGAAGCTGTCAGCAATTCAGCAGCTCGGCCCAATGTCGTAATCAAGAAATCTCAGACTCAAGGAAAAGTAAACCAGGTGGATTATGATCATTTAAATTGGTTACTCATTAGGTGGCTTGTTTTAGCTTCTCTACCTCCTTCAACTCTAGAAGAGAAGTGGCTCGTAAATTCCTACAAGTTTCTAAACCCGACTATACAAATTTGGCCTAGTGACAAGTACAAAACTATACTTGATGAAGTCTTCCGAAGCATGAGGGAAGATGTAAGAGCCTTGTTAGAACAGGTTTCTTTTAAGTTCTCCATCACACTTGATTTCTGGACTTCCTTTGAACAGATTTTCTATATGAGTGTATCATGTCAGTGGATTGACGAAAACTGGTGCTTCCAGAAGTTGCTTCTTGATATCTGCCGCGTACCCTATCCATGTGGGGGTGCAGAAATCTATCGTTGCCTCGTGAAAGTTCTTAAATTTTACAATATTGAAAGCAGAGTCCTGTCATGTACCCATGATAATAGTTCAAGTGCCATGCATGCCTGCCATACTCTGAAAGAGGACTTGGATGGTCAGAAAATAGGACCGTTCTGTTACATTCCCTGCGCTGCTCGAACTTTGAACCTGATAATAGTTGATGGATTGAGATCTGCAAAACAAGTAATTTCAAAGATCCGAGAATTTGTAATAGAGTTAAATGCCTCACCAATAATCTCTGAGGATTTTGTTCAAATATCTACAGCTTATCAAGAAGGTACTTGGAAGTTTCCTCTTGATGTTTCAACAAGGTGGAGTGGAAACTACCAAATGCTTGATCTTGTTCGTAAGGCTGGTAAATCAGTGGATTCGGTTATTCATAAATATGAGGAGACACTAGGCAGTAGGATACTGCTGAGCCCTTCTGAAAAAAGTGTGGTTAACATCATGCATCAATATCTTGAGCCATTCTACAAGACGACAAACGACCTCTGCACGAGCAATGTGCCAACAGTGGGGCTTGTCCTTTTCTTCATGGATCACATTTCAGAAACAATTGCTACCTGCAGAGAGTCATGTCCCAGCCCAGAATGGCTAAAAAGTGCTGCAGAAGAAATGGCTAAAAAGGCTAGAAATTATTTCAATCAGGTTTGCAACATATTTACATATATGACCGCTATTCTAGATCCTCGAATAAAGGCAGAGCTGATCCCTGATAGTTTAAACTTGCAAAGTTTTCTGGACGAAGCAAGGACACATTTTATAAGAAACTATTCTGTTAACCATTTCTCCTCCATGAGTTCTGGTTACAATGCACAAGAAATTGAAGATGGGGGAAGTGTTTCCTTTGCCGAGGAAATAGCTCGCAAAAAACGTAGGACAAACATGAGTTCTGCCACTGATGAGCTTACACAGTACTTATCAGAGGCTCCAGCTCCTATAGCAACCGATGTTCTAGAGTGGTGGAAAGTAAACAGTGCGCGCTACCGTCGACTGTCTGTGATGGCTAGAGATTTCTTGGCTGTGCAGGCAACTTCAGTTGTGCCTGAAGAACTTTTCTGTGGCAAGGGGGATGAAATTGACAAGCAACGATTCTGTATGCAGCATGATAGCACACAAGCCATTCTTTGTATCAAGTCGTGGATTCAGGTTGGCATCAAGTTCAAGTTTAAGTCGACCGAGATAGACTATGAGAGGTTGATGGAACTAGCAGCTGCTTCTGCAACAGATAATAGCCCTTCAAGTTCTGAGAAGAAGCAAAAATAA 2067 0.4122 MDWGVNSNNNHYRTYKEDHSNINKSMMDLELISNMDGHGLASSENQPIPVTSPLKPRKKTMTSVYLKFFETAADGKTRRCKFCGQTYSIATATGNLGRHLANRHPGYDKTGEAVSNSAARPNVVIKKSQTQGKVNQVDYDHLNWLLIRWLVLASLPPSTLEEKWLVNSYKFLNPTIQIWPSDKYKTILDEVFRSMREDVRALLEQVSFKFSITLDFWTSFEQIFYMSVSCQWIDENWCFQKLLLDICRVPYPCGGAEIYRCLVKVLKFYNIESRVLSCTHDNSSSAMHACHTLKEDLDGQKIGPFCYIPCAARTLNLIIVDGLRSAKQVISKIREFVIELNASPIISEDFVQISTAYQEGTWKFPLDVSTRWSGNYQMLDLVRKAGKSVDSVIHKYEETLGSRILLSPSEKSVVNIMHQYLEPFYKTTNDLCTSNVPTVGLVLFFMDHISETIATCRESCPSPEWLKSAAEEMAKKARNYFNQVCNIFTYMTAILDPRIKAELIPDSLNLQSFLDEARTHFIRNYSVNHFSSMSSGYNAQEIEDGGSVSFAEEIARKKRRTNMSSATDELTQYLSEAPAPIATDVLEWWKVNSARYRRLSVMARDFLAVQATSVVPEELFCGKGDEIDKQRFCMQHDSTQAILCIKSWIQVGIKFKFKSTEIDYERLMELAAASATDNSPSSSEKKQK* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4042 688 Pfam BED zinc finger 67 105 IPR003656 GO:0003677
Mtr4g4042 688 PANTHER BED ZINC FINGER AND HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 49 659 - -
Mtr4g4042 688 SMART bed5 60 107 - -
Mtr4g4042 688 PANTHER BED FINGER-RELATED 49 659 IPR045259 -
Mtr4g4042 688 Pfam hAT family C-terminal dimerisation region 569 649 IPR008906 GO:0046983
Mtr4g4042 688 SUPERFAMILY Ribonuclease H-like 196 651 IPR012337 -
Mtr4g4042 688 Pfam Domain of unknown function (DUF4413) 432 511 IPR025525 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4042 Mtr-Chr4 54219975 54223535 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4042 - - ahf:112708868 1099.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4042 4 54219975 54223535 Mtr4g4042 4 54219975 54223535 ECH