Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4039 ATGCTACAACACCCAAGAGTACTGCGAAGTTCCCCTCAACCATTCAACCCTTCATCCCATACATCAACACCATCACATTCATCATTCCAACAATTACCAACTACACCACATTTTCCAAACCTCAAACAGCAATGCAGATTGTCACGTAGAGAGCTCGCAATCTACAGCAACACTTGCTTGCTGCTTCTTTTGGGCAGTGGATCCAGAGCAAGAGCAGCAGAAGATGTTACCAACAGTGACAAACTAGGAGAGGATTTGACTAAAACTCCCAGCTGCACTGAAAGAAAACCAACAAAACAAGTTTTCTTTGACGTATCCATTGATCGGGAACCAGTTGGTCGCGTTACTATAGAGCTTTATGGAGATGATGTCCCTGCAGGAGTTGAGAGGTTTAGCAAGATTGTCAGTGGAGCTGCTGGTATAAGCTACAGAAGGAAAGAGTTCGTCAAAATCATGCCAAATTACGTCCAACATGGCGGACTTAGATCCTACGGGGTGGATGCAGAGCTTGCTAACAAAACAGGGAGTAATTTGGCTACTGAAAAACTTGTTGAGGAATGGGAGAGTGTGTACGAGAAATGCCCTGGGACTAAAAATGTGGCTGGTAGTGTAGGAATCATTGTGAGAGATCCATCAAAGCCACCTCCTAAGTTTAAACTGGTTGCAAGACTAGGGAAGCTAGAGATTGATCAAGAAGAAGTTGGAACCGATCCTAATGGGACAGAATTTGTCATTGCAACAAAGGATTCGCCAGAACTAGATGCTTCAACTCTGGTAATTGGAAGGGTGGTAGGAGGAATGGAGTTTGTACAGAAGATTAGTCAGGTAAAAACTGTACAAGAGAACACGAGCTCTCCATATTTTAGGGTGGCGAAGCTTATAGGAGACAAGAGGGCTGTTGTTGCAGAAAGAGGATTCAACCGCCCATATTCCAAAGTTGTCATTACAAACTGCGGTGTAATACAGTAG 969 0.4396 MLQHPRVLRSSPQPFNPSSHTSTPSHSSFQQLPTTPHFPNLKQQCRLSRRELAIYSNTCLLLLLGSGSRARAAEDVTNSDKLGEDLTKTPSCTERKPTKQVFFDVSIDREPVGRVTIELYGDDVPAGVERFSKIVSGAAGISYRRKEFVKIMPNYVQHGGLRSYGVDAELANKTGSNLATEKLVEEWESVYEKCPGTKNVAGSVGIIVRDPSKPPPKFKLVARLGKLEIDQEEVGTDPNGTEFVIATKDSPELDASTLVIGRVVGGMEFVQKISQVKTVQENTSSPYFRVAKLIGDKRAVVAERGFNRPYSKVVITNCGVIQ* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4039 322 MobiDBLite consensus disorder prediction 1 35 - -
Mtr4g4039 322 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 105 285 IPR002130 GO:0000413|GO:0003755
Mtr4g4039 322 Gene3D - 89 322 IPR029000 -
Mtr4g4039 322 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP26-2, CHLOROPLASTIC 1 322 IPR044185 -
Mtr4g4039 322 MobiDBLite consensus disorder prediction 9 35 - -
Mtr4g4039 322 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 102 320 IPR002130 GO:0000413|GO:0003755
Mtr4g4039 322 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 IPR002130 GO:0000413|GO:0003755
Mtr4g4039 322 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 227 242 IPR002130 GO:0000413|GO:0003755
Mtr4g4039 322 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 242 254 IPR002130 GO:0000413|GO:0003755
Mtr4g4039 322 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 255 270 IPR002130 GO:0000413|GO:0003755
Mtr4g4039 322 SUPERFAMILY Cyclophilin-like 97 321 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4039 Mtr-Chr4 54197109 54198608 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4039 K03768 - gmx:100796313 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4039 4 54197109 54198608 Mtr4g4039 4 54197109 54198608 ECH