Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4038 ATGAGCCAAGATTCTGAGAAGAGGTTTCGTTCCATCATGGATAAGCTCTTTCATTCTTCCAAATCTTCATCAAACAATCCTGATAAGAGTTCATCGGGGGTTCAATTATCAAGTTCAAGGGGTAAGAAACGTGGTTTTCAGTCAATTGTGGATAGGAGAGGGGATGAACAGTACTTATCAGCTACAGCAGTATCAGAATCCCAAGGACATTTGTGTAGACCGTGGGATCGTGCTGATTTTATGAGGAGATTAGCTACATTTAAATCTATATCATGGTTTGCTAAACCTAAGAAAGTAAGCGCTGTCAATTGTGCTAGAAGAGGTTGGATCAATGTGGATGTTGACACCATAGCCTGTGAAGAATGTGGAGCACGCCTTTTGTTCTCTACACCGGCTTCTTGGAATCACCACCAGGTGGAGAAGGCAGCCTTGGTCTTCAGCTTAAAATTGGATAATGGACATAAATTACTTTGTCCATGGATTGACAATGCCTGCAGTGAAACACTGGCACGATTTCCTCCCACATCTCCTCCAGTATTAGTTGATAATTTCAGAGAACGTTGCTCTGCTCTGTTGGAATTGTCAACTCTTCCACGTATTGCATCTTCTGCACTAGACCACATGCAAAGCCCGTATATGGATGACTTTCTTGGACAATCATTGATGCAGGAGTGTGGAAATGGTTCTGCCGAAAATTTTGGAATAGAAGATGTCAGTAGTCAAGAGGAGCTGAAGTTGTATTACCAGGCTCAAAGGCTAATAAGTTTATGCGGTTGGGAACTTCGTTATTTACCTTATGCAGTCGATTGCAGGGATGTATCAGATCAGTCTCATAAAAATTCAACTATTGTATACTCTCCTCGAGTAGTTTCTGATGCGAGGAATAACAATCTCACTGTCTATTCTGCTGACAACAATGAAAGTTCGAAAATGGATGAAAATTCCAAGCATTCTATTGGGGAGCAAATGGATCCCAATTCTGCAGTTTTGGATTGTTCCCTATGTGGAGCCACTGTTGGATTGTGGGCATTCTGTACAGTTCCCCGACCTGTGGAATCAATCAGATTAGTGGGATATGCAGAAGTGAATGTTGATAATGATCTTGAAAGTAGGCAGGGGGTAAATAATGCCTTGTCTGACATTGCTAATTCATCAAAGGACACGTCTTTGGGTTTAAATATGACAATTGCAGGGGGTCCTCCCCCAACAAAGCAAAACTTCAAAGCAATAATATCTCTGCCTATTATTGGTCAGAACTTAAGAGCTCGTCTTTCTTATGATTATGATATTAGAGATCATTTTTTTGTTGATCGGGGTGGTAGTCAGTCAGATTCACAGGAGATCAAGATTCAGGAGAAAACTGATAACACGGTTGATGCTTCTATTGGACAACTTGTTCCCGTGTCATCTGAGATAAGAGAAATTTCAAATTGTGAAACTGGTTCTCAACAAGCAAGCATTTGTGACTCGGTGTTAGACAATGATTTAGAGGGCACCAGTTCTGCAGGACAACCTTCTGGTTTTAAGGAGAAGATGCCAGTACAAGCAGAAACTGGTGGATTGAAGAATTCGTCTGCAGAAGATCCTAGTAGCTCTCAGACAGACATGGCAGAAGATGAAGCACTTTCACATAAGACCAAAGAAGGCAGTCATGTTGAAACTTCTGGGGTCAAAGAAAGAGCAGAGAATCCCATTAACCGCGAAGATGTACATAATAGTATAGGTAAGTTTAAGAATCCATCCCTGCCCGGTAAAGCAATGGAATTTGATCCAATCAGACAGCACAGACACTTCTGCCCCTGGATTGCATCAGAAGACGGTGTAGAGCCTGGTTGGAAACAAACATTATCTGCTCTGTATCGTCCAAAAGAACATTTGCGACATTCTTCAAATACATCTCCATCATCTATGTCCATTATGAAGGTAGATGACCCTGTCGGTTCAATCAGAAAGCTTTTCATGTCTCCACCTACAAGCAGAAGGAAGCTCACTCACATTTCGAGTCAAAATGCAGAGCATAGGTAG 2025 0.4168 MSQDSEKRFRSIMDKLFHSSKSSSNNPDKSSSGVQLSSSRGKKRGFQSIVDRRGDEQYLSATAVSESQGHLCRPWDRADFMRRLATFKSISWFAKPKKVSAVNCARRGWINVDVDTIACEECGARLLFSTPASWNHHQVEKAALVFSLKLDNGHKLLCPWIDNACSETLARFPPTSPPVLVDNFRERCSALLELSTLPRIASSALDHMQSPYMDDFLGQSLMQECGNGSAENFGIEDVSSQEELKLYYQAQRLISLCGWELRYLPYAVDCRDVSDQSHKNSTIVYSPRVVSDARNNNLTVYSADNNESSKMDENSKHSIGEQMDPNSAVLDCSLCGATVGLWAFCTVPRPVESIRLVGYAEVNVDNDLESRQGVNNALSDIANSSKDTSLGLNMTIAGGPPPTKQNFKAIISLPIIGQNLRARLSYDYDIRDHFFVDRGGSQSDSQEIKIQEKTDNTVDASIGQLVPVSSEIREISNCETGSQQASICDSVLDNDLEGTSSAGQPSGFKEKMPVQAETGGLKNSSAEDPSSSQTDMAEDEALSHKTKEGSHVETSGVKERAENPINREDVHNSIGKFKNPSLPGKAMEFDPIRQHRHFCPWIASEDGVEPGWKQTLSALYRPKEHLRHSSNTSPSSMSIMKVDDPVGSIRKLFMSPPTSRRKLTHISSQNAEHR* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4038 674 MobiDBLite consensus disorder prediction 538 566 - -
Mtr4g4038 674 MobiDBLite consensus disorder prediction 17 46 - -
Mtr4g4038 674 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 662 - -
Mtr4g4038 674 MobiDBLite consensus disorder prediction 517 566 - -
Mtr4g4038 674 MobiDBLite consensus disorder prediction 652 674 - -
Mtr4g4038 674 MobiDBLite consensus disorder prediction 518 537 - -
Mtr4g4038 674 MobiDBLite consensus disorder prediction 17 44 - -
Mtr4g4038 674 Pfam C3HC zinc finger-like 74 197 IPR012935 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4038 Mtr-Chr4 54191950 54196225 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4038 - - lja:Lj4g3v1784840.1 897.116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4038 4 54191950 54196225 Mtr4g4038 4 54191950 54196225 ECH