Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4003 ATGTGTAAACCAGAGAGTAACAGCAATAACTACAAGTGGCAAGATTTGGGTTGGATGGGTTTGAAAGCACAAAAAGAGAGACTAGCTTCGGGTTCGGGTTCGGGTTCGGGTTCGGGAAGAGGTAGAATGAAACTATGGATGATACGTGCAACTACAACGGTGATATTATGGACTTGTATAGTTCAATTAACAGCTATAGGTGATTTGTGGGGTCCTCGAGTTCTTAAAGGTTGGCCTTCGTGTTTTACTCATGTGGATTCTTCTGCTTCAAATTCTAGAGCGTTGGATAATAATAATGTTCAGTTTCTGCGTCCACCAATTCTTCCTCCCAAGAGAGTTTACAAAAACAATGGATACTTGATGGTTTCCTGCAATGGAGGATTGAATCAAATGAGAGCTGCGATATGTGATATGGTTGCCATTGCCCGATATTTAAATGTCACGCTTATAGTCCCTGAACTTGATAAAACATCCTTTTGGGCTGATCCTAGTGAATTCCAAGACATATTTGATGTGGATCATTTTATCACATCCTTGAGAGATGAGGTGCGGATATTGAAAGAGTTGCCTCCTAGACTTAAGCTGAAAGTGGAACGCGGTTTTCTTTACAGTATGCCACCCGTTAGTTGGTCCGACATATCTTACTATAAGAACCAGATTCTACCCTTGATACAAAAGCACAAAGTTGTCCATCTAAATAGAACGGATGCTCGGCTGGCTAATAATGGCCAACCTCCAGAAATTCAGAAGCTGCGATGCAGAGTTAATTTTGGTGCTCTGAGATTCACTTCTCAGATAGAGGAGTTGGGCAGAAAGGTGATCAAGCTTCTAAGGAAAAACGGTCCATTTTTGGTTCTTCATCTTAGGTATGAGATGGACATGTTAGCATTTTCTGGCTGTACTCAAGGTTGTAACAGTGATGAAGTGGAAGAGTTGACAAGAATGAGATATGCCTATCCTTGGTGGAAAGAGAAAATAATTAATTCTGACTTGAAAAGAAGAGATGGTTTATGTCCTCTAACACCCGAGGAGACTGCCCTTACACTAAGGGCTCTTGACATTGATCAAAACATTCAAATCTACATTGCAGCTGGTGAAATATATGGTGGAGAAAGAAGACGGGCAAGTCTTTCAAAGGAGTACCCAAAATTGGTCAGGAAGGAAACACTGTTGGAGCCATCCGATCTTCAATTTTTCCAAAATCATTCATCTCAGATGGCAGCATTGGATTATCTTGTGTCTTTAGAGAGTGATATTTTTGTTCCCACATATGATGGAAATATGGCCAAAGTAGTTGCGGGCCACCGCAGATATCTTGGGTTCAAGAAGACGATTTTACTGGACAGAAAGCTCTTAGTTGATTTAATAGATCAGTACTATAACGGTGCACTGAACTGGGACCAATTTTCTTCAGCTGTGAAGGAATCACATGCTCATCGCATGGGTAACCCTAGTAAAAGGTTGGTAATTCCTGACAAGCCCAAAGAAGAGGATTATTTCTATTCCAACCCAGAGGAATGTTTAGAACCATCAAATGATATGCTGAGTAGCACGTGA 1557 0.4104 MCKPESNSNNYKWQDLGWMGLKAQKERLASGSGSGSGSGRGRMKLWMIRATTTVILWTCIVQLTAIGDLWGPRVLKGWPSCFTHVDSSASNSRALDNNNVQFLRPPILPPKRVYKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTLIVPELDKTSFWADPSEFQDIFDVDHFITSLRDEVRILKELPPRLKLKVERGFLYSMPPVSWSDISYYKNQILPLIQKHKVVHLNRTDARLANNGQPPEIQKLRCRVNFGALRFTSQIEELGRKVIKLLRKNGPFLVLHLRYEMDMLAFSGCTQGCNSDEVEELTRMRYAYPWWKEKIINSDLKRRDGLCPLTPEETALTLRALDIDQNIQIYIAAGEIYGGERRRASLSKEYPKLVRKETLLEPSDLQFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVAGHRRYLGFKKTILLDRKLLVDLIDQYYNGALNWDQFSSAVKESHAHRMGNPSKRLVIPDKPKEEDYFYSNPEECLEPSNDMLSST* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4003 518 PANTHER GDP-FUCOSE O-FUCOSYLTRANSFERASE-LIKE PROTEIN 34 513 - -
Mtr4g4003 518 CDD O-FucT_plant 119 444 IPR024709 -
Mtr4g4003 518 PIRSF UCP009360 14 505 IPR024709 -
Mtr4g4003 518 Pfam GDP-fucose protein O-fucosyltransferase 119 439 IPR019378 -
Mtr4g4003 518 PANTHER OS02G0726500 PROTEIN-RELATED 34 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4003 Mtr-Chr4 53833823 53837720 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4003 115 508 Miscellaneous Gene Families AT2G37980 50.758 1.13e-133 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4003 K23280 - gmx:100793244 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4003 4 53833823 53837720 Mtr4g4003 4 53833823 53837720 ECH