Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g4002 ATGGAGTTATGGAAGAAAGGTCGAAGCTTTGCGGAAGAAACAGCGAAACGATCACAAGACCTTTCATTCGGTGCTCACAAATTCACTAAAATCATAGCAGAGAATGCCAAGGGGATCGTGGCACAAGCTTCCATCCATTTGGTTGAACCTTCATTCAACAACGATGTCGATATCAATCCCAATTTTGAGAGTTTCGGCATTACAGACGAATTGAGAGATTTCGTCAAAGGAATCACTGTCACTACCTTCCGAGATTTCCCTCTTCAAGATGATACAGAACTGTTTGATGTTCCCGCAGTTTCTAATATTAGGCAGGATTTAACTGAGTGGCAGGAAAAACATGCCAATCTTGTTCTTTCTACTGTCAAGGAAATTTCAAAATTGAGGTATGAGTTGTGTCCACATGTCATGAAAGAGAGGAAGTTTTGGAGAATATATTTTATACTTGTGAATAATCATATCGCACCCTATGAGAATTGGTACATGCAAGATGCTAAACTAAAATCATCCGAGCAAGTTAAAGACCAAATAGTGATGAAACCATTAGAAGTTGAATTAACTTCGAATCAAGAAGTCAAGGAGGTGAATAAAGAGACCAAAACATCAAATTCATCACGTCAGCAAGACTTGGATGCATTTCTTCTAGGAGATACAGAAAACAGCGATGATGACCCAGATGACGATTGA 687 0.3901 MELWKKGRSFAEETAKRSQDLSFGAHKFTKIIAENAKGIVAQASIHLVEPSFNNDVDINPNFESFGITDELRDFVKGITVTTFRDFPLQDDTELFDVPAVSNIRQDLTEWQEKHANLVLSTVKEISKLRYELCPHVMKERKFWRIYFILVNNHIAPYENWYMQDAKLKSSEQVKDQIVMKPLEVELTSNQEVKEVNKETKTSNSSRQQDLDAFLLGDTENSDDDPDDD* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g4002 228 MobiDBLite consensus disorder prediction 188 228 - -
Mtr4g4002 228 Pfam BSD domain 109 154 IPR005607 -
Mtr4g4002 228 ProSiteProfiles BSD domain profile. 109 154 IPR005607 -
Mtr4g4002 228 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 35 - -
Mtr4g4002 228 PANTHER BSD DOMAIN-CONTAINING PROTEIN 53 227 - -
Mtr4g4002 228 SUPERFAMILY BSD domain-like 66 157 IPR035925 -
Mtr4g4002 228 SMART wurzfinal6 102 154 IPR005607 -
Mtr4g4002 228 Gene3D BSD domain 81 177 IPR035925 -
Mtr4g4002 228 PANTHER BSD DOMAIN PROTEIN 53 227 - -
Mtr4g4002 228 PANTHER BSD DOMAIN PROTEIN 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g4002 Mtr-Chr4 53818695 53824617 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g4002 64 225 EF-hand Containing Proteins AT1G69030 53.659 2.88e-56 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g4002 - - mtr:MTR_4g110020 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4002 4 53818695 53824617 Mtr4g4002 4 53818695 53824617 ECH