Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3998 ATGGGCTGGGCAGTAGCACTACATGGTGGTGCCGGCGTCCCATTTTCACTTCCACCGGAAGCCCGTCAGCCACGCGAAGAAGCTCTCCGTCACTGCCTCCAAATTGGTGTCAAAGCTCTCAAATCCAACATGTCCCCTCTAGACGTCGTTGAGCTTGTTGTTCGTGAGTTGGAGAATATTCCACACTTCAACGCTGGAAGAGGTTCTGTTCTTACCAACAAAGGCACGGTTGAAATGGAAGCTTCTATTATGGATGGAAACACTATGAAATGTGGTGCTGTTTCTGGTCTTAGCACCGTTGTCAATGCTATTTCTTTGGCTCGTTTGGTTATGGATAATACTCCTCATATTTATTTAGCTTTTGATGGAGCTGAGGATTTTGCAAGACAACAAGGGGTTGAGACTGTAGATACAAGCCATTTCATTACTCCAGAAAATATTGAAAGACTAAATCAGGCAAAAGAAGCAGATAGGGTCCAGATTGATTATACCCAACCCATCCAAAATGATACTACCAAGAGTGAAACAGAAACACCATTTGCCAATGGTGATAGTCAACTTGGAACTGTTGGATGTGTAGCTGTTGATAGCAACGGAAATCTAGCTTCAGCAACATCAACTGGTGGATTAGTGAACAAAATGGTTGGTCGAATTGGTGACACGCCACTCATAGGTGCTGGAACATATGCCAATGAATTATGTGCAGTTTCTGCAACAGGGATAGGCGAAGCACTAATACGCGGGACAGTAGCAAGAGATGTGGCTGCAATGATGGAATTCAAAGGTCTTTCTCTAAAGGAAGCTGCTGATTGTGTTGTACATGAGCGCATACCAAAGGGCACTGTTGGTTTGGTTGCTGTGTCTGCTGCTGGAGAAGTTGCAATGCCCTATAATACACCAGGAATGTTTAGAGCCTGCGCTACTGAAGATGGGTATTCTGAGGTTGCAATTTGGTCAGATGCTATAATTGAGTGA 975 0.4451 MGWAVALHGGAGVPFSLPPEARQPREEALRHCLQIGVKALKSNMSPLDVVELVVRELENIPHFNAGRGSVLTNKGTVEMEASIMDGNTMKCGAVSGLSTVVNAISLARLVMDNTPHIYLAFDGAEDFARQQGVETVDTSHFITPENIERLNQAKEADRVQIDYTQPIQNDTTKSETETPFANGDSQLGTVGCVAVDSNGNLASATSTGGLVNKMVGRIGDTPLIGAGTYANELCAVSATGIGEALIRGTVARDVAAMMEFKGLSLKEAADCVVHERIPKGTVGLVAVSAAGEVAMPYNTPGMFRACATEDGYSEVAIWSDAIIE* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3998 324 PANTHER ISOASPARTYL PEPTIDASE/L-ASPARAGINASE 1 318 - -
Mtr4g3998 324 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 24 319 IPR029055 -
Mtr4g3998 324 Gene3D (Glycosyl)asparaginase 189 321 - -
Mtr4g3998 324 CDD Asparaginase_2 4 311 - -
Mtr4g3998 324 PANTHER L-ASPARAGINASE 1 318 IPR000246 GO:0016787
Mtr4g3998 324 Pfam Asparaginase 3 318 IPR000246 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3998 Mtr-Chr4 53760416 53762673 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3998 5 300 Miscellaneous Gene Families AT4G00590 25.610 3.72e-19 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3998 K13051 - gmx:100799400 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3998 4 53760416 53762673 Mtr4g3998 4 53760416 53762673 ECH