Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3996 ATGGTTAGACCACGTTTCAAGTTGAATAGTTTGTGCGTTGGTCATGCTAGAACACCTCGTGTTCGAGCATGTTCTGCATCTTCTTTTGGATCAAAATTTGCAAACAGAACTGAGTTTTCAAGCAACGGAGTTCAAGACTCTGGAAGAGATAATAAAGGGGATGAAAGTGGGAATAAAGTGATGGTTGTTGTGGATTCCAGCTTTGAAGCTAAAGGAGCTCTTGATTGGGCACTCTCACACACTATTCAGAGTCAAGATACCGTTGTTCTTGTTCATGTAGCTAGACCCCTCAGAGAAGGCGACGAGTCTGATGTGAAGTTTAATCTGAAGGCTTATCAACTTCTCCTAGACATGAAGAGTATGTGTGAAATGAAGAAACTTGGGGTGCTAGTGAATATAGTATTGCTTGAAGGGGATGAAAAGGGTGCTGCAATAGTGCAAGAGGCAAAGCAACAAAGGGTGTCTTTATTGGTGGTGGGACAAAGAAAACGTTCTCTTTTGTGGTGCTTGATGAGGAAGTGGACAAGAAAGAGAACAAAAAGTGGGGTTGCTGAGTATTGTATACAGAACTCCCCTTGTATGACCATTGCAGTGAGGAGGAAGAATAAAAAACTTGGAGGATATTTGATTACTACCAAACGCCATAAAAACTTTTGGCTTTTGGCTTAA 669 0.4141 MVRPRFKLNSLCVGHARTPRVRACSASSFGSKFANRTEFSSNGVQDSGRDNKGDESGNKVMVVVDSSFEAKGALDWALSHTIQSQDTVVLVHVARPLREGDESDVKFNLKAYQLLLDMKSMCEMKKLGVLVNIVLLEGDEKGAAIVQEAKQQRVSLLVVGQRKRSLLWCLMRKWTRKRTKSGVAEYCIQNSPCMTIAVRRKNKKLGGYLITTKRHKNFWLLA* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3996 222 Gene3D HUPs 47 202 IPR014729 -
Mtr4g3996 222 Pfam Universal stress protein family 59 199 IPR006016 -
Mtr4g3996 222 CDD USP_Like 59 198 - -
Mtr4g3996 222 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 222 - -
Mtr4g3996 222 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 58 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3996 Mtr-Chr4 53751669 53753108 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3996 47 165 Receptor kinase-like Gene Family AT1G17540 26.829 1.25e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3996 - - gmx:100527308 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3996 4 53751669 53753108 Mtr4g3996 4 53751669 53753108 ECH