Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3985 ATGTCTTCTTCATTATCGGGTTTTGCACCTTTTGTTTTTCTATTGCTCGTGATTGGGGGCACGGCTAGGCCTTTGTATCCACTTCCTGGCAAAGGTGACCATGGTACTAAGCAGCCTCTTCAAACTTTTCGCCCATATAACGTTGCACATAGGGGCTCAAATGGAGAACTTCCTGAAGAAACTCGCGAGGCATATCTGAGAGCTATTGAGGAAGGTGCAGACTTCATTGAAACAGATATATTATCTTCCAAAGATGGTGTTCTTATATGTTTCCACGACGTTACTCTTGATAATACTACTGACATAGCAAAATACAAAGAGTTTACTGATCGTAAAAGAACATATGAAGTCGAAGGGGTCAATATCACTGGATTTTTTGTCGTTGATTTCACATTAAAGGAATTAAAGTCGCTGAGGGTGAATCAGAGGTACTGCTTTAGGGATCAACAGTTTAACGGAAAATTTCAAATAATCACTTTTGAAGAGTTCATTACCATAGCATTGGATGCACCCAGAGTAGTTGGAATATATCCTGAGATAAAAAATCCAGTACTTATCAATCAGCATGTGAAATGGTCGGACGGCAAAAGATTTGAGGACAGGTTTGTTGAAACACTTCGGAAATATGGATACAAGGGTTCATACCTGTCAAAACATTGGTTGAAACAACCTGCATTTATACAGTCATTTGCTCCAACTTCACTTGTGTATATATCAAATCAAACGGACTTGCCTAAGATTTTTTTAATCGATAATGTTGATATTTCAACACAAGACACTAATCAGTCATATTGGGAAATTACATCTGATACATACCTAGACTACATAAAGCAATATGTTGTAGGAATTGGACCTTGGAAGGATACTATAGTACCTGAGGTTAACAACTATGTGATGACTCCTTCGGATCTTGTTGCCAGGGCACATGCTCATAATCTGCAGGTGCATCCATACACGTACAGAAATGAGAACAAGTTTTTGCATTTCAACTTTAGTCAAGATCCTTACAAGGAGTATGATTACTGGATCAACAAAATGGGAATTGATGGTCTGTTTACAGATTTCACTGGCAGTCTTCATAATTTTCAGGAATGGACAACCCCTAACCGTCAAGATGACAAGACTGCATCCGAGCTATTGCATAAAATTGCTGTGTTAGCATCCGCTTATGAATAA 1176 0.3852 MSSSLSGFAPFVFLLLVIGGTARPLYPLPGKGDHGTKQPLQTFRPYNVAHRGSNGELPEETREAYLRAIEEGADFIETDILSSKDGVLICFHDVTLDNTTDIAKYKEFTDRKRTYEVEGVNITGFFVVDFTLKELKSLRVNQRYCFRDQQFNGKFQIITFEEFITIALDAPRVVGIYPEIKNPVLINQHVKWSDGKRFEDRFVETLRKYGYKGSYLSKHWLKQPAFIQSFAPTSLVYISNQTDLPKIFLIDNVDISTQDTNQSYWEITSDTYLDYIKQYVVGIGPWKDTIVPEVNNYVMTPSDLVARAHAHNLQVHPYTYRNENKFLHFNFSQDPYKEYDYWINKMGIDGLFTDFTGSLHNFQEWTTPNRQDDKTASELLHKIAVLASAYE* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3985 391 Gene3D Phosphatidylinositol (PI) phosphodiesterase 44 362 IPR017946 GO:0006629|GO:0008081
Mtr4g3985 391 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 8 390 - -
Mtr4g3985 391 CDD GDPD_ScGlpQ1_like 45 356 - -
Mtr4g3985 391 ProSiteProfiles GP-PDE domain profile. 45 363 IPR030395 GO:0006629|GO:0008081
Mtr4g3985 391 Pfam Glycerophosphoryl diester phosphodiesterase family 50 357 IPR030395 GO:0006629|GO:0008081
Mtr4g3985 391 SUPERFAMILY PLC-like phosphodiesterases 45 361 IPR017946 GO:0006629|GO:0008081
Mtr4g3985 391 PANTHER OS01G0763600 PROTEIN 8 390 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3985 5 390 Acyl Lipid Metabolism Gene Families AT1G74210 72.868 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3985 K01126 - gmx:100778145 662.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3985 4 53593216 53597422 Mtr4g3985 4 53593216 53597422 ECH