Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3977 ATGGCTTTTGCTACTCTTGCACTTGCACTTCTTCTTTTTCCCTTCACCGCCATTCCTTCAAGTGCTAATTGGTGCGTGTGCAAGGATGGAGCTGATGCAATCTTGCAAAAGACCTTGGACTATGCTTGTGGAGCTGGAGCTGACTGTAACCCTCTTCATACAAACGCTCCTTGTTACAACCCAAACACCGTTAGAGCTCATTGTAGCTATGCTGTGAATAGCTATTACCAGAAGAAGGGTCAACAAGCACTAGCTTGTGACTTTGCAGGAACAGCTACTGTTGTTACATCTGATCCAAGTGTTAGTGGCTGTGCCTACCCTTCAAGTGCCAGTGGTTCAGGCACTAGCACAACAAGCCCATCGACAGGTACCGGAACAGGCACCGGCATGGGAACCACCCCATCGACAAGTACCGGCACTGGCACTGGCACCAGCACGGGCACTGGCATGGGAACTGGCACCAGCACGGGTGCCACTGGTAATACTCCATACAGTACAACAGCTCCTGGTGGTGTGTTAGGAGGTATAGGCAGTGGTATGGGGCCTTCTGGTGCTGGAGGAATGAATGATGATAGTCATGGTGGTCTTAGACTTGTGGACACTAGTTTCTTATCAATCCCTCTCTTTTCTGTCTTTATTATGTTTTGGTGGGGTTAA 657 0.4932 MAFATLALALLLFPFTAIPSSANWCVCKDGADAILQKTLDYACGAGADCNPLHTNAPCYNPNTVRAHCSYAVNSYYQKKGQQALACDFAGTATVVTSDPSVSGCAYPSSASGSGTSTTSPSTGTGTGTGMGTTPSTSTGTGTGTSTGTGMGTGTSTGATGNTPYSTTAPGGVLGGIGSGMGPSGAGGMNDDSHGGLRLVDTSFLSIPLFSVFIMFWWG* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3977 218 PANTHER BETA-1,3 GLUCANASE 1 206 IPR044788 -
Mtr4g3977 218 Gene3D - 18 117 - -
Mtr4g3977 218 SMART X8_cls 23 106 IPR012946 -
Mtr4g3977 218 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3 1 206 - -
Mtr4g3977 218 MobiDBLite consensus disorder prediction 106 168 - -
Mtr4g3977 218 Pfam X8 domain 24 93 IPR012946 -
Mtr4g3977 218 MobiDBLite consensus disorder prediction 106 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3977 Mtr-Chr4 53530432 53534587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3977 20 107 Glycoside Hydrolase AT4G34480 46.067 8.44e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3977 - - gmx:100812033 211.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3977 4 53530432 53534587 Mtr4g3977 4 53530432 53534587 ECH