Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3960 ATGGCATTGTTAGGTGCAAATGTGCAAACTAATGGCAATTTTAGAGAATACTATTTAACAAAGGAGCTCATCTTTGACTCTGGAGGTAGCACATGGACCTCATCATCTAATGTTAATAATGAATTAAGGACTGATTTCTACAACATGGGTCCCTTCCAATTATCATCACCTTGTACCCATTTAGGCTACAACCAGGAGCTTGTAAAACAGACAATACTCAAACATGAAGCCATGTTTAAGGAACAAATTCGTGAGCTCCACCGTGTTTATCATAAACAGAGGGAATTAATGGATGAATTTAAAAGGAGTGAATTACATAAACAAAATGTAAGGTTGGAGCCATCATGGTCTAGTTCTGCTTTGTTGTCGAAAAACGCAGAAAAGACATTTTACTCACCAAACCGGCCCTGGTCAACCTCTCAATCATCTGTTTTATTTGCCGAAAGCATCCAGTTGCCACTGGCATTTGCCCAAGAAAAAAGCAAGCAAATTTTTCCTGCTCATGCTTCAACTGTAACCGAAGAACCTTTAAAAGATTATAAACTACTAGAGTCCATGTGCAGAAAAGTCGGTAAAAAAGTATTGGATCTTGAACTTCCTGCTGATGAGTACATTGATAGTGATGAAGGTGAAGAAAATGTAAGGGTTACTGAAGTGCTCCAGGATTCGGCTTATTCTTTAAATGGAGTTTCTCAGGTTTTGTGCGACAATCATGACAAACCACGCGGAAATAGTTCTAGGGGGTCTGACAACTTAAATGTATCATTTAAGCTCGACTTAAATGTACCATTTAGGCTTGAAGTAGAGGCAGCTACAAAGTCTTCTGATAAGGAGGTCCCTTCACTTCATATGAACAATTGTTTATATGATCTGTCAATGAAAACAATATTTGGATCTCAAAACTTACACAATGATGCCATCAACAAAAGACAGGATCTTGAAGGAGGCTCACATAACCAACGGCCAGACAATGAGAAGAAATGTGAATGGAAGTTCTCAGGACACAATGGTGGTTTGTTGGATTCTTTTGCTAAAAGTATTCATACGGAAAAGCAATATTTTTCAGTTGATTCATTAAGTAAGAATATGGAGCAATTTGTTGATCTTTCATGTTTTCATTCCTCACATCAAATTAACCGAGGTCCTTGGACAGAGAGAAAATTTTCTAGCAGTGCGAGCTCCACACAAACTCAATGTCCCACAAGTAAAGGTTTGCTTGGAGCAATGGGGTTGCCTTGTCTTAAAGAAAGTAAATTCTCAACCCAAATTGAATCTGCTGTTGTAAATCCTTATGAAACAGGAGTTACACATGGTTTGGAATTAAAGAAGATTGAGGAAAGCAACTTAGGTGCAGAGAAGACTCTTGCATTTCACAGCAATGGAAATCCTCGCATGTCATCCGATCTGCATTATTTTCACGACTTTGCCACCAAACTCTTCCAAAACCATCCCAAAAATCAAAGGATTGAAGATATTGAGAAAGACTGCATAGCTGATGTAAAGTCACCTTGTGCTGATGTGCCTGACTTGGGGGAACAGATTCCGGCAGGTGAGCATTTGATTGAGAATGAGAAGAAGCGTGAACTTTTGGCAGGTATTATCGACCTAAATTCATGCATGACAGAGGATGAGAATATGCCAATTGCTATTGATGTTGATTTACATGCACCGTCAAGTCCAGAGAACAAGGAATGCTCTCCACCCAGAGGAGAATCAGATGAAAACCAGCTTGTGACGCCCTTTCAATTTGCAGAACAAGAGGATCTTCATGTGCAAGAAGAGCAAACCAGATATGCAGCAGAGGCTTTGATTTCCATATCAGGATTTGCACCCCAGAAAGATATCCAAATGACACCTTGCTCACCGTCTAAATCTTTTGTGAATAGTCCTCTTCACTGGTTTGCTGGAATTGTTTCCACAACTATGTATCATCCAGAGAATGATAATGAAACTGATTTCAATGGTAAGGTTAACAATCTCGAGGAGTTTCTGTCTGGTGAAATGGATTACTTCGAGTTCATGACCTTAAATTTGACGGACACAAAAGCCCCAGATCACTGCTGTAAGAGTATGGGCCAAACCGAACAAATTGGTGGATCAGCTTCAACACCAACTCAGCCAAGGAAGAGTGTTCGGACGTATAGAGGAAGGTGGCGAAAGGATTTTCAGAGTGAAATCCTCCCAAGCATTGCTTCTTTGTCAAGGTATGAGGTGACTGAGGATCTTCAGACCATTGGAAGCCTTGTAAGTACTGGTACTCAGTCCGAGACAGGTTCTCTGAGAAATGCAAGTAGAAATCTACTGAGTAAGGGGAAGAGAAGATCGTGTGCTTCAGCTTCTAACACCGAAGACACAGACTTGCTGTTGAATTTGAAACAGCTAACTGCTATCACTAAATTGGAATTTGAGAAAAAGGGCCTAATGAGTTGGGGAAAGACGTGTAAAAAGCGAAGGGGACAGAGATTTCGCATCACTAATCCTCAGTTTATTTGGAGCTAA 2499 0.4022 MALLGANVQTNGNFREYYLTKELIFDSGGSTWTSSSNVNNELRTDFYNMGPFQLSSPCTHLGYNQELVKQTILKHEAMFKEQIRELHRVYHKQRELMDEFKRSELHKQNVRLEPSWSSSALLSKNAEKTFYSPNRPWSTSQSSVLFAESIQLPLAFAQEKSKQIFPAHASTVTEEPLKDYKLLESMCRKVGKKVLDLELPADEYIDSDEGEENVRVTEVLQDSAYSLNGVSQVLCDNHDKPRGNSSRGSDNLNVSFKLDLNVPFRLEVEAATKSSDKEVPSLHMNNCLYDLSMKTIFGSQNLHNDAINKRQDLEGGSHNQRPDNEKKCEWKFSGHNGGLLDSFAKSIHTEKQYFSVDSLSKNMEQFVDLSCFHSSHQINRGPWTERKFSSSASSTQTQCPTSKGLLGAMGLPCLKESKFSTQIESAVVNPYETGVTHGLELKKIEESNLGAEKTLAFHSNGNPRMSSDLHYFHDFATKLFQNHPKNQRIEDIEKDCIADVKSPCADVPDLGEQIPAGEHLIENEKKRELLAGIIDLNSCMTEDENMPIAIDVDLHAPSSPENKECSPPRGESDENQLVTPFQFAEQEDLHVQEEQTRYAAEALISISGFAPQKDIQMTPCSPSKSFVNSPLHWFAGIVSTTMYHPENDNETDFNGKVNNLEEFLSGEMDYFEFMTLNLTDTKAPDHCCKSMGQTEQIGGSASTPTQPRKSVRTYRGRWRKDFQSEILPSIASLSRYEVTEDLQTIGSLVSTGTQSETGSLRNASRNLLSKGKRRSCASASNTEDTDLLLNLKQLTAITKLEFEKKGLMSWGKTCKKRRGQRFRITNPQFIWS* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3960 832 MobiDBLite consensus disorder prediction 693 710 - -
Mtr4g3960 832 PANTHER - 3 832 - -
Mtr4g3960 832 MobiDBLite consensus disorder prediction 693 713 - -
Mtr4g3960 832 PANTHER GB|AAF67766.1 3 832 - -
Mtr4g3960 832 MobiDBLite consensus disorder prediction 554 574 - -
Mtr4g3960 832 Pfam Plant protein of unknown function (DUF863) 142 396 IPR008581 -
Mtr4g3960 832 Pfam Plant protein of unknown function (DUF863) 479 822 IPR008581 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3960 Mtr-Chr4 53366200 53370698 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3960 - - mtr:MTR_4g109190 1687.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3960 4 53366200 53370698 Mtr4g3960 4 53366200 53370698 ECH