Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3958 ATGGTTGGTGAGATTGATACTACACCGATTGAACCTGTTCGGCATGGCGTCTCATTATTTGATGATAAGGGTGATAATAAGAAATTTCTACCCAGGAATAAGCGTGACTATGAAAAAGAGATTGAGGATTTGACAACGGAATTGGCCAGCTACAAGGTGCAATTAGAAGCAAAGCATGTTGCACACATCAAAGCACTTCTTAAGCCAGAACAAAACCAAAAGATGATTCAGGAATTGTCTACCTTGTTGAAAAACTCTGATATTGAAAGAAACAAGTATGTGAACGAACATTCAGAGGGTAGAGCTAGTAGCAAAGACGAGCTTGAATCAATGATGAAAGAGATGGCTGATCTTAGATTAGAAACTGTAAAAGTTCGGGACCAACTTTCACATGTTTTGAGTGAATTGAAGTCCACACAAAGAGAGCTTCTGAACAAAGATACTGATATTTTTGCTGCTAGAGATTCAGAATTGAATGCTGTCACTAAGGCGGAACAGTTGGAAAATGAGTTGAAGATGGAAAAGGAACAGAAAGAAGAACTTCTGCATCAAGTAAATGAGCTTAATGAACGTGTTCACAGGTCAAAACTTGCTGCTATTAAAGTTGAGAAACAGAATATTGGAATGTTGTATCAGAAAGACGAGGAAATTCAATTAGCTACAAAAGATAATGATCAAGCGCAACAAGAGATAGTAGATATGAGAAAGAATATAGATATGCTGCATGGATTGCAAAATAAACAAATGGTTGATGAAACACTCACTTTATCCGAGGATTCTCCTTCTAATGCCATAAAGGACTTATACAATGACATTGAACAAAAGGAAAGATATATCATGGATCAATCTTCTTGCATTGATAGATTAGAAATGGAATTAAATCAGTTAAAAAATGAACTTACAAGTGCAAAGGAGGAGATAAATGAATTGAATATTAACAATGAATCACTCACAAGTGAGTTACACAGGACCAAAGAAGAGTTGAAGACGAATAAGGAGAGAGACATTGATGCACAGGTAGAGATTGCATTGCTGAAATCTCATCTTCAAGAATATAGGTTGGCTTATAAGGATGGATATATCACTGATCACTCAAAGGGTGAAGCTGAAGAAAACAATGACAGTATCACAATCTCTTTGGAAGATTACAACTACATGATTAAAGAAGTCCAGAAAGGAAATAAAAAAGGAAACCAGATAGAGTTAGCATTGATGAAAAAGGAGCTTGAAAATGCATCATTGAAGATTTCAGAGATGAGGACTCGTGCCGAACAGGCTATCAGCAGAGCTGAGTTAGCTGAGAATGGTAAAGCAGCATTGGAGGACAAAATAAGGAGACACCGCGAACATAGGCTGAGAAAGAAGGCTGCTCTAACCGCGCTTCGGGAGGAATCTACGCCTAAACCATTTACCCCTTCAACATCATATGGAACACCAAGTATGTACCAGCCATTAAGTAAAGTTCTCAATATAAAGTTGTAA 1482 0.3725 MVGEIDTTPIEPVRHGVSLFDDKGDNKKFLPRNKRDYEKEIEDLTTELASYKVQLEAKHVAHIKALLKPEQNQKMIQELSTLLKNSDIERNKYVNEHSEGRASSKDELESMMKEMADLRLETVKVRDQLSHVLSELKSTQRELLNKDTDIFAARDSELNAVTKAEQLENELKMEKEQKEELLHQVNELNERVHRSKLAAIKVEKQNIGMLYQKDEEIQLATKDNDQAQQEIVDMRKNIDMLHGLQNKQMVDETLTLSEDSPSNAIKDLYNDIEQKERYIMDQSSCIDRLEMELNQLKNELTSAKEEINELNINNESLTSELHRTKEELKTNKERDIDAQVEIALLKSHLQEYRLAYKDGYITDHSKGEAEENNDSITISLEDYNYMIKEVQKGNKKGNQIELALMKKELENASLKISEMRTRAEQAISRAELAENGKAALEDKIRRHREHRLRKKAALTALREESTPKPFTPSTSYGTPSMYQPLSKVLNIKL* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3958 493 Coils Coil 279 334 - -
Mtr4g3958 493 Coils Coil 101 128 - -
Mtr4g3958 493 PANTHER EXPRESSED PROTEIN 363 492 - -
Mtr4g3958 493 PANTHER EXPRESSED PROTEIN 3 366 - -
Mtr4g3958 493 Coils Coil 402 450 - -
Mtr4g3958 493 Pfam Weak chloroplast movement under blue light 4 352 IPR008545 -
Mtr4g3958 493 Coils Coil 34 54 - -
Mtr4g3958 493 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 3 366 - -
Mtr4g3958 493 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 363 492 - -
Mtr4g3958 493 Coils Coil 157 198 - -
Mtr4g3958 493 Coils Coil 210 237 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3958 - - cam:101496589 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3958 4 53344138 53346226 Mtr4g3958 4 53344138 53346226 ECH