Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3957 ATGGATAAAGCTATGACTAAACTTGGAAGCTTTTGGATCTCCAAGAAAGCCAAGGAAGAGATTTCCCACATAACCAACGACTTATCTTCTCTCTCAAATAGTGTTGAAGACAAGGCGAAACTTTTCATCAACAAGCTCAAAGGAAAAACTCAGAAATCATTACCAGATCTCCTTAGGGAGCACAACCTTCCTCCAGGTCTGTTCCCCCGTAATATAACATGCTACGAATTTGATGAATCAAAAGGAAAGTTGATGGTGCATTTGTCCTCCCCTTCTGAGGTATGCTTCAAGGACTCGTCTATTGTGAGATATTCAAATCGCGTCAAAGGAACATTGTCAAAGGGAAAACTCATTGTTATAGATGGAATGAAGACCAAGGTTCTTGTGTGGGTTAAGGTCACTAGTGTTTATGTTGAGAGTTATAAGTCTGACAAAGTATGGTTTACTACCACTGGTGTTAAAAAATCAAGGCCTAAAGATGCCTATGAAATGCCTCGTGAAGCTGTTAAGGTGGAAGATTATTGA 525 0.3962 MDKAMTKLGSFWISKKAKEEISHITNDLSSLSNSVEDKAKLFINKLKGKTQKSLPDLLREHNLPPGLFPRNITCYEFDESKGKLMVHLSSPSEVCFKDSSIVRYSNRVKGTLSKGKLIVIDGMKTKVLVWVKVTSVYVESYKSDKVWFTTTGVKKSRPKDAYEMPREAVKVEDY* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3957 174 PANTHER DUF538 FAMILY PROTEIN 3 174 - -
Mtr4g3957 174 Gene3D - 32 174 IPR036758 -
Mtr4g3957 174 Pfam Protein of unknown function, DUF538 56 163 IPR007493 -
Mtr4g3957 174 PANTHER T31J12.3 PROTEIN-RELATED 3 174 IPR007493 -
Mtr4g3957 174 SUPERFAMILY At5g01610-like 3 172 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3957 Mtr-Chr4 53339489 53341080 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3957 - - gmx:100776470 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3957 4 53339489 53341080 Mtr4g3957 4 53339489 53341080 ECH