Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3947 ATGGGAAAAGAAAATGGTTCACTTCACAACAGAAGCAGCAGCGCAGTTTTACCAACCACAGCAACAAACTCCAACAGCAAAAACCGTCGTGGTCGTCAGATCTCAAAAACATTCAACAACGTTAAAATCACCATCCTCTGTGGCTTCGTCACCATCCTCGTCCTACGTGGCACCATAGGCGTTAACCTCATTTCCTCCGACTCCGACGCCGTTAACCAAAACATGATCGAAGAAACCAACCGCATCATCGCCGAGATCCGATCCGACGCCGACCCATCTGATCCTGACGATAAAGACAACACCTTTTTCAACCCAAATGCCACTTTTACCCTCGGCCCCAAAATCTCCGATTGGGATTCTGACCGTAAAGCTTGGCTGAATCAAAACCCTGAATACCCGAGTTTTGTTCGAGGTAAAGCTCGAATTTTGCTTCTTACTGGGTCTCCTCCTAAGCCTTGTGATAACCCAATTGGGGATCATTATTTGTTAAAGTCTATTAAGAATAAGATTGATTATTGTAGATTACATGGGATTGAAATTGTTTATAATATGGCTCATCTTGACATGGAGTTAGCTGGTTATTGGGCTAAATTGCCTATGATTAGGAGGTTAATGTTGTCACACCCTGAAGTTGAATGGATTTGGTGGATGGATAGTGATGCTTTTTTTACAGATATGGTTTTTGAGCTTCCTTTGTCTAAGTATGATGATTATAATTTGGTCATTCATGGTTACCCTGATTTGTTGTTTGAGCAGAAGTCATGGATTGCTATCAATACTGGTAGTTTTCTTTTTAGGAATTGTCAGTGGTCTTTGGATTTGCTTGATGTTTGGGCTCCTATGGGTCCGAAAGGTCCTGTCAGGGAAGAGGCGGGAAAGATTTTGACGGCTAATCTTAAGGGGAGACCGGCTTTTGAGGCGGATGATCAGTCTGCGTTGATATATTTGTTGTTGTCGAAGAAGGAGAAGTGGATGGATAAGGTGTTTCTTGAGAATTCTTACTATTTGCATGGTTATTGGGCTGGGTTGGTTGATCGGTATGAGGAGATGATTGAGAAGTATCATCCGGGTTTAGGGGATGAGAGGTGGCCGTTTGTGACTCATTTTGTGGGTTGTAAGCCGTGTGGAAGTTATGGTGATTATCCGGTTGAGAGGTGTCTTAGTAGCATGGAAAGGGCTTTCAACTTCGCTGATAATCAGGTGCTCAAACTCTACGGGTTCAGGCATCGCGGTCTATTGAGTCCTAAGATTAAGAGAATTAGAAATGAGACAGTTACTCCTTTGGAGTTTGTAGACCAGTTTGATATTCGAAGGCATTCTACAGAAAGCATTGAATCAAAAAGCTAG 1347 0.4284 MGKENGSLHNRSSSAVLPTTATNSNSKNRRGRQISKTFNNVKITILCGFVTILVLRGTIGVNLISSDSDAVNQNMIEETNRIIAEIRSDADPSDPDDKDNTFFNPNATFTLGPKISDWDSDRKAWLNQNPEYPSFVRGKARILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNMAHLDMELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAFFTDMVFELPLSKYDDYNLVIHGYPDLLFEQKSWIAINTGSFLFRNCQWSLDLLDVWAPMGPKGPVREEAGKILTANLKGRPAFEADDQSALIYLLLSKKEKWMDKVFLENSYYLHGYWAGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETVTPLEFVDQFDIRRHSTESIESKS* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3947 448 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 3-RELATED 10 442 - -
Mtr4g3947 448 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 139 286 IPR029044 -
Mtr4g3947 448 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 10 442 IPR008630 GO:0016021|GO:0016757
Mtr4g3947 448 MobiDBLite consensus disorder prediction 1 31 - -
Mtr4g3947 448 Pfam galactosyl transferase GMA12/MNN10 family 139 377 IPR008630 GO:0016021|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3947 Mtr-Chr4 53233512 53235423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3947 1 448 Glycosyltransferase AT5G07720 77.243 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3947 K08238 - gmx:100793238 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3947 4 53233512 53235423 Mtr4g3947 4 53233512 53235423 ECH