Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3935 ATGAGAGGTGGTTCTTCTCTTGCTGGTGGAAGTAACAAACCAGAACGACGAAGAAGAAACTCAACATCGCCATTGAAGGATCGAACCAAAACAACTTCAACAAACTTGTCATCTTCATCCAAACGAAGCTCTTCACCCTCTGCTACTACTCTCCTCGATGATGACCCAACCACTGTTCTCTTTGATGAATACACTAACCCTAACCCTCGAAGCTTCCCTCACAGTGTTAAGCAGAAATGTTGGGAAAAAGCTGATAAGGTTAAGGGACGGGACCCAGATCGATGGCGTAGGGACCCACTTGGGAACCTTATCTTTCGGAAGCTTGTAGGTTGTCCTGGTTGTTTGTGTCATGACTATGATCACATTGTTCCTTACTCTAAGGGGGGCCAAAGCACATTGGAAAACTGTCAAGTATTACAGGCAACAGTTAATCGATCAAAGGGTAATCGAACAGATATCTCCAAATCTGATCTTATTCAGAAGAGTTCTTATTGCAGGGTTTCAGATCGTGATATGGATCTTCTGGAATTGTCTGCTTTTGGCAATGTTCGACGTGGACAAGATACTGGAGGATGTAGAATTCAATAA 588 0.4337 MRGGSSLAGGSNKPERRRRNSTSPLKDRTKTTSTNLSSSSKRSSSPSATTLLDDDPTTVLFDEYTNPNPRSFPHSVKQKCWEKADKVKGRDPDRWRRDPLGNLIFRKLVGCPGCLCHDYDHIVPYSKGGQSTLENCQVLQATVNRSKGNRTDISKSDLIQKSSYCRVSDRDMDLLELSAFGNVRRGQDTGGCRIQ* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3935 195 MobiDBLite consensus disorder prediction 1 56 - -
Mtr4g3935 195 Pfam HNH endonuclease 117 150 IPR002711 GO:0003676|GO:0004519
Mtr4g3935 195 Gene3D - 76 166 - -
Mtr4g3935 195 PANTHER HNH ENDONUCLEASE 14 195 - -
Mtr4g3935 195 MobiDBLite consensus disorder prediction 26 54 - -
Mtr4g3935 195 CDD HNHc 103 148 IPR003615 -
Mtr4g3935 195 SMART HNH_5 99 145 IPR003615 -
Mtr4g3935 195 PANTHER HNH ENDONUCLEASE 14 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3935 Mtr-Chr4 53094867 53098513 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3935 - - gmx:100500174 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3935 4 53094867 53098513 Mtr4g3935 4 53094867 53098513 ECH