Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3933 ATGAAGTTTAGTAAGGTGATAGTTATTATAGTAGCCATCATTTTGGGTATTGGGATTGAAGAATGCCATTGTAAGGTTGTTCAATTCATATTTGGAGACTCTCTTTCGGATGTTGGAAACAACATGCATCTCTCTAGAAGCCTAGCTCAGGCAAGTTTGCCTTGGTATGGTATAGACATGGGTAATGGGTTACCTAATGGTAGGTTCTCTAATGGACGCACAGTTGCTGACATAATAGGTGACAGTTTAGGCCTACCTAGGCCCCCTCCAGTCCTTGACACATCTTTAACCGAGAAAGATATACTAATAAATGGATTGAACTATGCTTCTGGTGGTGGCGGTATCTTGAATGAAACTGGCACCTATTTTATCCAAAAATTATCACTAGACAAACAAATTGAGTTGTTTCAAGGGACACAAAAACTGATTAGAAGCAAAATTGGAAAAAGGGCTGCAGACAAGTTTTTTAGAGAAGCTCAATATGTTGTTGCTTTAGGTAGCAATGACTTTATCAACAACTATTTGATGCCTCTTTACACTGATTCATGGACATACAATGATGAAACCTTCATGGATTACTTGATAGGAACACTAAGAAGACAACTAAAGCTACTACATAGTTTAGGAGCAAGGCAATTGCAGCTTTTTGGGCTGGGTCCAATGGGATGCATTCCACTTCAAAGGGTACTTACTACAACAGGAAATTGTCGAGAAAGTGTAAACAAACTGGCTCTTAGCTTTAATAAAGCTTCAAGTGAACTAATAGATGACTTGGTGAAGCAACTTCCTAACTCAAATTATAGATTTGGAGATGCATATGATGTTGTCTCTGATTTGATTAGCAATCCACTTAAGTACGGATTCCAAAACTCAGATTCACCCTGTTGTTCCTTTGGGAGAATTAGACCAGCACTTACATGTGTACCTGCATCAACGCTATGCTCAGACAGAAGCAAATATGTGTTTTGGGACGAGTATCATCCCTCAGACAGTGCTAATGAGCTCATTGCAAATGAACTTATTAAGAAATTTGGATTTTTACGTGACGGTCAAAATGCTGCTCCTTCACCAGCACCTGCTGCTATTGCTCCATCTCCAGAAGATTAA 1107 0.3911 MKFSKVIVIIVAIILGIGIEECHCKVVQFIFGDSLSDVGNNMHLSRSLAQASLPWYGIDMGNGLPNGRFSNGRTVADIIGDSLGLPRPPPVLDTSLTEKDILINGLNYASGGGGILNETGTYFIQKLSLDKQIELFQGTQKLIRSKIGKRAADKFFREAQYVVALGSNDFINNYLMPLYTDSWTYNDETFMDYLIGTLRRQLKLLHSLGARQLQLFGLGPMGCIPLQRVLTTTGNCRESVNKLALSFNKASSELIDDLVKQLPNSNYRFGDAYDVVSDLISNPLKYGFQNSDSPCCSFGRIRPALTCVPASTLCSDRSKYVFWDEYHPSDSANELIANELIKKFGFLRDGQNAAPSPAPAAIAPSPED* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3933 368 SUPERFAMILY SGNH hydrolase 160 343 - -
Mtr4g3933 368 Gene3D SGNH hydrolase 27 344 IPR036514 -
Mtr4g3933 368 Pfam GDSL-like Lipase/Acylhydrolase 29 339 IPR001087 GO:0016788
Mtr4g3933 368 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 358 - -
Mtr4g3933 368 CDD SGNH_plant_lipase_like 29 343 IPR035669 -
Mtr4g3933 368 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 1 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3933 Mtr-Chr4 53087305 53089784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3933 29 340 Acyl Lipid Metabolism Gene Families AT4G10950 32.484 2.85e-60 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3933 - - gmx:100815129 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3933 4 53087305 53089784 Mtr4g3933 4 53087305 53089784 ECH