Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3932 ATGAGCTCCATCGCCCTCAAATCCTTCCTCGGCCTCCGCATTTCCTCACCAGAAACCCCCCAATTCTCCTACCGCCCCAAACCCATCACCCACCGCCGCAAGTTCACCGTCGTCGCTGCAGCAACCAGCCCAAAAATCGATGGCCGAAACCTCCGTGTTGCCGTCATCGGCGGTGGTCCAGCTGGAGGTGCAGCAGCAGAAACACTTGCAAAAGGTGGCATAGAAACCTTCCTCATTGAACGTAAAATGGACAACTGCAAACCATGTGGAGGAGCCATTCCTCTATGCATGGTTGGTGAGTTCGACCTTCCACTAGACATCATAGACCGCCGTGTTACCAAGATGAAGATGATTTCTCCGTCGAATGTCGCCGTCGACATTGGTAGGACACTTAAGTCTCATGAGTATATTGGTATGGTGAGGCGTGAGGTGCTTGATGATTATCTTAGAAATAGGGCTAAGGAAAATGGAGCGAATATTATTAATGGGTTGTTTTTGAAAATGGATATTCCTAAAGAAAAGAATGCTCCTTATGTTCTTCATTATTCTTCTTATGATGGGAAAACTGGTGGGGTTGGTGAAAAAACTACTTTGGAAGTTGATGTTGTTATTGGTGCTGATGGAGCTAATTCTAGAGTTGCTAAGTCTATTGATGCTGGTGATTATGAATATGCTATTGCATTTCAGGAGAGGATAAAAATCCCGGATGATAAAATGGCTTACTATGAGGATCTTGCGGAGATGTACGTGGGCGACGACGTTTCTCCTGATTTCTATGGTTGGGTATTCCCGAAATGTGACCATGTTGCTGTCGGCACCGGAACTGTGACACACAAGGGAGACATCAAGAAGTTCCAACTAGCAACAAGGAAAAGAGCCGAGGACAAGATCTTAGGGGGCAAGATTATCCGCGTGGAGGCTCACCCTATACCGGAACATCCAAGGCCACGAAGATTGTCAGGGAGGGTCGCGCTTGTGGGTGATGCTGCTGGCTACGTGACCAAATGTTCCGGAGAAGGAATCTATTTTGCAGCCAAGAGTGGGAGGATGTGTGCAGAGGCAATTGTGCAGGGTTCGGCGAATGGAAAGAGGATGGTTGAAGAAGGGGATTTGAGGAAATATTTGGAGAAATGGGACAAGACTTACTGGCCTACTTACAAGGTTTTGGATATTCTTCAGAAGGTGTTCTATAGGTCCAATCCTGCTAGGGAAGCTTTTGTTGAAATGTGTGCTGATGAATATGTGCAGAAGATGACATTTGATAGTTATCTGTACAAGACTGTTGTGCCTGGGAGTCCATTGGAAGATATCAAGTTGGCTATCAACACCATTGGAAGCTTGGTTAGGGCTAATGCTCTAAGGAGGGAGATGGACAAACTTAATGTATGA 1389 0.4636 MSSIALKSFLGLRISSPETPQFSYRPKPITHRRKFTVVAAATSPKIDGRNLRVAVIGGGPAGGAAAETLAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKMISPSNVAVDIGRTLKSHEYIGMVRREVLDDYLRNRAKENGANIINGLFLKMDIPKEKNAPYVLHYSSYDGKTGGVGEKTTLEVDVVIGADGANSRVAKSIDAGDYEYAIAFQERIKIPDDKMAYYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRKRAEDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVQGSANGKRMVEEGDLRKYLEKWDKTYWPTYKVLDILQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTVVPGSPLEDIKLAINTIGSLVRANALRREMDKLNV* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3932 462 Gene3D - 51 461 IPR036188 -
Mtr4g3932 462 PANTHER GERANYLGERANYL DIPHOSPHATE REDUCTASE 39 461 - -
Mtr4g3932 462 PANTHER OS01G0265000 PROTEIN 39 461 - -
Mtr4g3932 462 TIGRFAM GG-red-SF: geranylgeranyl reductase family 53 355 IPR011777 GO:0016628
Mtr4g3932 462 TIGRFAM BchP-ChlP: geranylgeranyl reductase 52 449 IPR010253 GO:0015979|GO:0015995|GO:0045550
Mtr4g3932 462 SUPERFAMILY FAD/NAD(P)-binding domain 51 433 IPR036188 -
Mtr4g3932 462 TIGRFAM ChlP: geranylgeranyl reductase 51 449 IPR011774 GO:0045550
Mtr4g3932 462 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 52 74 - -
Mtr4g3932 462 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 199 214 - -
Mtr4g3932 462 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 320 335 - -
Mtr4g3932 462 Pfam Pyridine nucleotide-disulphide oxidoreductase 52 221 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3932 Mtr-Chr4 53063896 53066531 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3932 K10960 - gmx:100779933 841.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3932 4 53063896 53066531 Mtr4g3932 4 53063896 53066531 ECH