Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3931 ATGGCAGCAGCAGCATCAGCTACATTTACTATTGGAACCACCCAAACAGGGAGGTCACTTCCTCAATCAAGTCCTTTTGGTTTGAAATTCAATTCCCAGGTTAATTTCAACACCTTCTCTGGCCTCAAAGCCATGCCATCTCTCAGATGTGACTCTGAATCATCTTTCTCTGGCAAAGAAACTTGTGCCGCTCTGCGTGCAACTTTTGCACCCAAAGCTCAAAAGGAAAATCAAAACCTCACCCGCAATTTGCAGCCTCAGGCATCCTACAAAGTAGCGGTTCTCGGTGCTGCAGGAGGGATTGGTCAACCACTGGCACTTCTCATCAAGATGTCGCCTTTGGTTTCCGACCTGCATCTCTATGATATCGCAAATGTTAAGGGAGTTGCTGCTGATATCAGTCACTGCAACACTCCTTCAAAGGTTTTGGATTTCACAGGTGCTTCTGAGTTAGCAAATTGTTTGAAAGGCGTCGATGTTGTTGTTATACCTGCTGGTGTTCCTAGGAAGCCCGGCATGACTCGTGATGACCTTTTCAACATCAATGCTGGTATAGTCAGGGACTTGGTCACTGCCGTTGCAGATAATTGCCCCAATGCTTTTATTCATATTATCAGTAATCCAGTGAACTCTACAGTTCCTATTGCCGCTGAAATTCTTAAACAGAAGGGTGTCTATGATCCTAAGAAGCTCTTTGGTGTTTCTACACTTGATGTTGTGAGGGCAAACACATTTGTTGCTCAGAGGAAGAACCTGAGGTTGATTGATGTGGATGTTCCAGTTGTTGGAGGTCATGCCGGGATTACAATTCTTCCTCTCTTGTCAAAGACAAAACCCTCAGCGAGTTTCACTGATGAAGAAATTGAGGAGCTAACTGTCAGGATTCAAAATGCTGGAACTGAGGTTGTTGAGGCAAAGGCTGGTGCAGGGTCTGCTACTTTGTCAATGGCTTATGCAGCAGCAAGATTTGTTGAATCATCTCTTCGTGCACTTGACGGAGACGCTGATGTGTATGAGTGCTCATTCGTACAGTCAGATCTGACCGACCTTCCTTTTTTTGCTTCAAGGGTGAAGATTGGTAGGAAAGGAGTCGAGGCTTTAATTCCAACTGATCTCCAAGGATTGAGTGAGTATGAGCAGAAGGCTTTGGAAGCACTTAAGCCAGAACTTAAGGCCAGCATCGAGAAGGGGGTTGCTTTTGCTCAAAAGCAAACTGTTGCTGCTTAG 1227 0.4531 MAAAASATFTIGTTQTGRSLPQSSPFGLKFNSQVNFNTFSGLKAMPSLRCDSESSFSGKETCAALRATFAPKAQKENQNLTRNLQPQASYKVAVLGAAGGIGQPLALLIKMSPLVSDLHLYDIANVKGVAADISHCNTPSKVLDFTGASELANCLKGVDVVVIPAGVPRKPGMTRDDLFNINAGIVRDLVTAVADNCPNAFIHIISNPVNSTVPIAAEILKQKGVYDPKKLFGVSTLDVVRANTFVAQRKNLRLIDVDVPVVGGHAGITILPLLSKTKPSASFTDEEIEELTVRIQNAGTEVVEAKAGAGSATLSMAYAAARFVESSLRALDGDADVYECSFVQSDLTDLPFFASRVKIGRKGVEALIPTDLQGLSEYEQKALEALKPELKASIEKGVAFAQKQTVAA* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3931 408 Gene3D - 235 406 IPR015955 GO:0003824|GO:0016616
Mtr4g3931 408 SUPERFAMILY LDH C-terminal domain-like 235 401 IPR015955 GO:0003824|GO:0016616
Mtr4g3931 408 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 85 234 IPR036291 -
Mtr4g3931 408 PANTHER MALATE DEHYDROGENASE, GLYOXYSOMAL 25 408 - -
Mtr4g3931 408 PANTHER MALATE AND LACTATE DEHYDROGENASE 25 408 - -
Mtr4g3931 408 CDD MDH_glyoxysomal_mitochondrial 90 401 IPR010097 GO:0006099|GO:0030060
Mtr4g3931 408 Pfam lactate/malate dehydrogenase, NAD binding domain 91 233 IPR001236 GO:0016491
Mtr4g3931 408 Gene3D - 88 234 - -
Mtr4g3931 408 TIGRFAM MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 91 402 IPR010097 GO:0006099|GO:0030060
Mtr4g3931 408 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 236 400 IPR022383 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3931 Mtr-Chr4 53060127 53062661 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3931 K00026 - gmx:100783173 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3931 4 53060127 53062661 Mtr4g3931 4 53060127 53062661 ECH