Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3914 ATGGCTAAGGTATCCTTATTATTTTGTGTCCTCTTGGGGCTCCTGGTTCACACTCATGCACATTCACATAAAAGTGAGAAAAGCGAGAAGATTGGATTTTATGAATTAAAAAAAGGAAGTATGAGGGTTAATTTGACAAACTATGGTGCTTCAATTGTCGCTGTTTATGTACCTGATAAACATGGGAAAGTGGCTGATGTTGTTCTTGGCTATGATTCTATTGAGCAATATGAGACTGATGGAGTCTACTTCGGTGGTCTTATTGGGCGTGTGGCAAATAGGATCGGAGGAGCTCAATTCACTTTGGATGGTAAAACATACAAATTGCCAGCTAATGATCATGGGAACACACTCCATGGTGGCCAGAAAGGGTTCGGTGATAATGTATGGAAAGTAAAAATTCACAAGGATGATAGTCATGTAACATTTACCTACGAGAGTTTTGATGGGGAACAAGGTTTCCCCGGAAAGCTTGACGTAAGTGTGACATACATGTTGCTTGAAAAGAACATATTGGGTGTGAAAATGACTGCCAAGCCAGTAAACAAACCCACACCAGTAAATCTAGCACAACATGCATACTGGAACCTAGGAGGACACAACAGTGGTGACATTCTTAATCACAGTGTTCAAATCTTTGGTTCATCCATCACACCGGTAGACGATAAACTCATCCCAACAGGAAAACTTGAATCCGTGAAGAACACGCCATATGATTTCCTTAAACCAAAACAAGTTGGAAGTCAAATTAACGACCTTCCTGGTTTATACGACATTAACTATGCGATTGATGTGAATGGTCAAAATCATTTAACCAAGGTTTGTATAGTGAAAGAACCTGTCTCAGGAAGGAAAATGGAGTTGTGGTCAAACCAAGTTGGATTGCAATACTATACTAGTGGAATGTTGACTGATACTAAAGGAAAGGATGGAGCTACATATCACAAGTATGGTGGCATTGCTTTGGAGACACAGGGTTTCCCAGATTCTGTGAATAAGCCTAACTTTCCATCTCAGATTGTTAAGCCTGGAGAGACATACAAGCATATCATGGTTTATCGATTCATGGCTAGCTAG 1077 0.402 MAKVSLLFCVLLGLLVHTHAHSHKSEKSEKIGFYELKKGSMRVNLTNYGASIVAVYVPDKHGKVADVVLGYDSIEQYETDGVYFGGLIGRVANRIGGAQFTLDGKTYKLPANDHGNTLHGGQKGFGDNVWKVKIHKDDSHVTFTYESFDGEQGFPGKLDVSVTYMLLEKNILGVKMTAKPVNKPTPVNLAQHAYWNLGGHNSGDILNHSVQIFGSSITPVDDKLIPTGKLESVKNTPYDFLKPKQVGSQINDLPGLYDINYAIDVNGQNHLTKVCIVKEPVSGRKMELWSNQVGLQYYTSGMLTDTKGKDGATYHKYGGIALETQGFPDSVNKPNFPSQIVKPGETYKHIMVYRFMAS* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3914 358 PIRSF GALM 15 358 IPR015443 GO:0016853|GO:0019318
Mtr4g3914 358 SUPERFAMILY Galactose mutarotase-like 27 355 IPR011013 GO:0003824|GO:0005975|GO:0030246
Mtr4g3914 358 CDD galactose_mutarotase_like 34 355 - -
Mtr4g3914 358 PANTHER ALDOSE-1-EPIMERASE 8 357 - -
Mtr4g3914 358 Pfam Aldose 1-epimerase 34 354 IPR008183 GO:0005975|GO:0016853
Mtr4g3914 358 Gene3D - 16 357 IPR014718 GO:0030246
Mtr4g3914 358 PANTHER ALDOSE 1-EPIMERASE 8 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3914 Mtr-Chr4 52894450 52896872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3914 28 357 Miscellaneous Gene Families AT3G47800 59.697 2.06e-150 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3914 K01785 - gmx:100807070 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3914 4 52894450 52896872 Mtr4g3914 4 52894450 52896872 ECH