Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3893 ATGGCCAACGTTAGAGGTACTCCAAGGTATGGAGTAATAAGACCTGTGGCACGCCCTTCTGTTGTTGAAGATATTGTACCTAATTCTGCATGGACAGAGGACTCTGCTGCCCATTATCTTGTAGTGGATCTTCCTGAATTTGTGAAGGAAGATGTGAAGCTTCAGGTTGATAGCAGTGGCCGTATTGTTGTCAAGGGAGAAAGGCAAGCAAGTGAGCAGAAACGTGTTCGTTTTCACCTGAGTTTTCCAGAACCAAATGATTCTGAGATTGATAACATAGCCGGAAAATTCGATGGGGGAATCCTTTACGTGACTCTCCCCAAGCGAATTGTACAAGAGAATAATAAAGAAAGCGACACTGAGAAAGCTGGAATCCATGATGTTAAAAGAGCAGAAGAAATTGATAGCCATACAACCAATGCAGATGATGACAGTAGAGATCATAATCAACATGTTGGTCATGTAGAACGCGAAGATGATCATAATCAACACGTTGGTCGTGTAGAACACGAAGATGATCATAATCAACATGTTCGTCATGTAGAACACGAAGATGATCATAATCAACATGTTGGTCATGAAGAACATGAACATAAACAAATTGAAAATGCACACATGAGAGATTTTTCTGAACAAGTAATGAGGAAGTGGGATCAAGAAACCATGTTAAGAAGTGCATTGGATGTTTTGATGAAAAACAAAGGAATTGTTGCAACAGCTGTTATAGCCTTCTCCTTGGGGATGTATGTATCTAGCAAATTTCAATTTTCAGAAGCACCATAA 783 0.3985 MANVRGTPRYGVIRPVARPSVVEDIVPNSAWTEDSAAHYLVVDLPEFVKEDVKLQVDSSGRIVVKGERQASEQKRVRFHLSFPEPNDSEIDNIAGKFDGGILYVTLPKRIVQENNKESDTEKAGIHDVKRAEEIDSHTTNADDDSRDHNQHVGHVEREDDHNQHVGRVEHEDDHNQHVRHVEHEDDHNQHVGHEEHEHKQIENAHMRDFSEQVMRKWDQETMLRSALDVLMKNKGIVATAVIAFSLGMYVSSKFQFSEAP* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3893 260 CDD ACD_sHsps-like 31 108 - -
Mtr4g3893 260 Pfam Hsp20/alpha crystallin family 31 117 IPR002068 -
Mtr4g3893 260 Gene3D - 16 112 IPR008978 -
Mtr4g3893 260 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 20 123 IPR002068 -
Mtr4g3893 260 PANTHER INACTIVE PROTEIN RESTRICTED TEV MOVEMENT 2-LIKE 17 258 - -
Mtr4g3893 260 SUPERFAMILY HSP20-like chaperones 18 114 IPR008978 -
Mtr4g3893 260 PANTHER HEAT SHOCK PROTEIN 26 17 258 IPR045045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3893 Mtr-Chr4 52691772 52693101 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3893 - - cam:101491080 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3893 4 52691772 52693101 Mtr4g3893 4 52691772 52693101 ECH