Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3892 ATGAACATGGCAACGACGCCGTTTCAACAAGGACCGCCCCAAACGGTGAGAAGATTGGCGGTGGAAGTTGTTGACGCACGCAACCTTCTTCCCAAAGATGGTCAAGGAAGTTCCAGTCCTTACGTGGTGGCGGACTTCGACGGTCAGAGAAAACGAACCACCACCCGGTTTAAGGAGCTCAACCCGGTTTGGAACGAGTTGCTTGAGTTCATCGTTTCTGACCCGGATAATATGGAGTTTGAAGAGCTTGAAGTTGAGGTTTATAATGATAAGAAATTTGGGAATGGTAGTGGTCGCAAGAATCATTTTCTGGGTAGGGTTAAGCTTTATGGAACACAGTTTTCTGGTAGAGGTGAAGAGGCTCTGGTTTATTATACTTTAGAGAAGAAGAGTGTTTTCAGTTGGATTAGAGGTGAAATCGGTTTGAAGATTTATTACTACGATGAGTTGTTACAGCAAGATGAACAGCAACAACAACAACAGGATCAGCCATCGCAACCGCCGCCGGAGGAAGAACGACACGGTGGTGGCGCAGAGCAAGAGAGGAACAATCACAGTCACAGGCATCCGATGATGGTTGAAGAGGGAAGAGTTTTTCAGGTTGAACAGATGGAGCATTGTGTGCCACTTCCTGACGGTCCTCCTTCACCGCGTGTGGTGGTTATGGAAGAATCACCTTCTCCGGTGGTTCGTGTTCAACAAGATCCACCGTTGCCGGAGATGTACGCTCAACCGGAACCAGAAATGCAGTATCATCATCATCATCCTGAAGTGAGGAAGATGCAAACAATGAGGAATGATAGAGTGAAGATTATGAAGAGACCTAATGGTAACGGTAATGGTGATTATGCGCCGAAAGATATCTCCGGGAAGAAACCTAACGGTGAATCTGAGAGGATTCATCCCTATGATCTAGTTGAGCCAATGCAGTATCTGTTTGTTAGAATCGTGAAAGTTCGCGGGCTTAATCCTCCAACTGAAAGCCCGTTCGTGAAGGTTCGAACCTCTAGTCACTACGTCAGATCAAAGCCCGCGAGTTTTAGGCCCAACGAGCCCAATGACTCACCGGAGTGGAACCAGGTTTTTGCCCTTGGTTACAGCAAAACCGATGCAACCGGTGCTACGTTGGAGATTTCAGTTTGGGATTCACCTACAGAGCAATTTCTCGGTGGTGTTTGCTTTGATCTTTCTGATGTACCTATTCGTGATTCTCCAGATAGTCCTCTTGCTCCACAATGGTACCGTCTCGAAGGTGGCGCAGCAGAACAAAACGCCGTTAGAGTCTCCGGCGACATACAGCTTTCCGTTTGGATCGGAACTCAATCCGACGATGCTTTTCCAGAAGCATGGAGTTCAGATGCACCGTACGTTGCACACACTCGCTCAAAGGTTTATCAATCACCGAAGCTTTGGTATCTGAGAGTAACAGTAATGGAAGCACAAGACCTGAATCTAACACCGAATCTACCACCGTTAACGGCGCCGGAGATAAGAGTGAAGGTTCAGTTAGGGTTTCAATCACAGAGAACAAGAAGAGGCTCAATGAACCACCACAGCATGTCGTTTCACTGGCACGAAGATCTTCTCTTTGTCGCCGGTGAGCCACTAGAAGATTCCATGGTCCTTCTCGTAGAAGATCGCACCACCAAGGAAGCGGCGTTACTCGGCCACGTGGTGATTCCTCTGACGTCAATCGAACAGCGTATAGACGACCGCCACGTGCCAGCCAAATGGTTCCCGTTAGAAGGTGGGTCCTACTGTGGGAGAGTCCACCTACGCCTCTGTTTAGAAGGTGGTTATCACGTGCTTGATGAAGCGGCGCACGTGTGTAGTGATTTTCGTCCCACCGCGAAATCTCTATGGAAACCTCCGGTTGGAATTCTTGAACTTGGAATCTTAGGTGCTCGTGGTCTTCTTCCTATGAAATCCAAGGGTCCAGGAAAAGGGTCCACTGATTCTTACTGTGTGGCCAAGTATGGCAAAAAATGGGTCCGAACCCGAACCGTGACGGATAGCTTCGACCCACGGTGGAACGAACAGTACACATGGCAGGTATATGATCCTTGCACTGTCTTAACCGTAGGTGTATTTGACAACTGGCGTATGTTTGCTGATGTGGCAGAAGAAAAACCAGATTGCCGTATAGGCAAAATTCGTATACGGGTATCCACTCTAGAGAGCAATAAAATCTACACAAGTTCCTATCCATTACTAGTTCTGACTCGAAACGGTTTGAAGAAAATGGGTGAAATCGAGTTAGCGGTTAGGTTTGCATGCCACGGGTTTTTTCCTGATACATGTGCGGTTTATCAACAACCATTGCTTCCAAAAATGCACTACATTCGTCCACTTGGCGTGGCCCAACAGGAGGCTCTCCGCGGGGCAGCCACTAAGATGGTAGCTCAGTGGCTGGCTCGTTCAGAGCCTCCCATGGGGCACGAGGTTGTTCGTTACATGTTGGATGCTGATTCACATGCTTGGAGTATGAGGAAAAGTAAGGCCAATTGGTTTAGAATTGTGGCAGTTTTAGCTTGGGCTGTTGGATTAGCTAAGTGGTTAGATGATATAAGAAGATGGAAAAATCCAGTTACAACGGTTTTGCTTCATATACTTTACTTGGTACTTGTTTGGTATCCTGATTTAATTGTTCCAACCGGGTTTTTATATGTAGTTTTGATTGGGATATGGTATTACCGTTTTAGACCCAAGATACCAGCTGGTATGGATACAAGATTATCACAAGCTGAAGCTGTTGATCCAGATGAATTAGATGAAGAATTTGACACAATGCCTAGCTCCAAACCACCTGATTTGGTTCGTGTTCGTTATGACAGGTTAAGAATGTTGGCTGCAAGGGTGCAAACTGTTTTGGGTGATTTTGCTACACAGGGTGAGAGGGTTCAAGCATTGGTTAGTTGGAGAGATCCAAGAGCTACAAAATTGTTCATTGGAGTGTGTCTTGTTATTGCTGTTATACTCTATTCAGTGCCTCCTAAAATGGTTGCTGTGGCTTTAGGATTCTACTATCTTCGTCATCCAATGTTTAGGAACCCAATGCCTCCGGCTAGTTTGAACTTTTTCAGAAGACTTCCTAGTTTGTCTGATAGATTGATGTAG 3117 0.4642 MNMATTPFQQGPPQTVRRLAVEVVDARNLLPKDGQGSSSPYVVADFDGQRKRTTTRFKELNPVWNELLEFIVSDPDNMEFEELEVEVYNDKKFGNGSGRKNHFLGRVKLYGTQFSGRGEEALVYYTLEKKSVFSWIRGEIGLKIYYYDELLQQDEQQQQQQDQPSQPPPEEERHGGGAEQERNNHSHRHPMMVEEGRVFQVEQMEHCVPLPDGPPSPRVVVMEESPSPVVRVQQDPPLPEMYAQPEPEMQYHHHHPEVRKMQTMRNDRVKIMKRPNGNGNGDYAPKDISGKKPNGESERIHPYDLVEPMQYLFVRIVKVRGLNPPTESPFVKVRTSSHYVRSKPASFRPNEPNDSPEWNQVFALGYSKTDATGATLEISVWDSPTEQFLGGVCFDLSDVPIRDSPDSPLAPQWYRLEGGAAEQNAVRVSGDIQLSVWIGTQSDDAFPEAWSSDAPYVAHTRSKVYQSPKLWYLRVTVMEAQDLNLTPNLPPLTAPEIRVKVQLGFQSQRTRRGSMNHHSMSFHWHEDLLFVAGEPLEDSMVLLVEDRTTKEAALLGHVVIPLTSIEQRIDDRHVPAKWFPLEGGSYCGRVHLRLCLEGGYHVLDEAAHVCSDFRPTAKSLWKPPVGILELGILGARGLLPMKSKGPGKGSTDSYCVAKYGKKWVRTRTVTDSFDPRWNEQYTWQVYDPCTVLTVGVFDNWRMFADVAEEKPDCRIGKIRIRVSTLESNKIYTSSYPLLVLTRNGLKKMGEIELAVRFACHGFFPDTCAVYQQPLLPKMHYIRPLGVAQQEALRGAATKMVAQWLARSEPPMGHEVVRYMLDADSHAWSMRKSKANWFRIVAVLAWAVGLAKWLDDIRRWKNPVTTVLLHILYLVLVWYPDLIVPTGFLYVVLIGIWYYRFRPKIPAGMDTRLSQAEAVDPDELDEEFDTMPSSKPPDLVRVRYDRLRMLAARVQTVLGDFATQGERVQALVSWRDPRATKLFIGVCLVIAVILYSVPPKMVAVALGFYYLRHPMFRNPMPPASLNFFRRLPSLSDRLM* 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3892 1038 Gene3D C2 domain 623 760 IPR035892 -
Mtr4g3892 1038 MobiDBLite consensus disorder prediction 167 188 - -
Mtr4g3892 1038 Pfam C2 domain 626 737 IPR000008 -
Mtr4g3892 1038 Pfam C2 domain 311 415 IPR000008 -
Mtr4g3892 1038 Pfam C2 domain 471 581 IPR000008 -
Mtr4g3892 1038 Pfam C2 domain 18 110 IPR000008 -
Mtr4g3892 1038 CDD C2D_MCTP_PRT_plant 627 754 - -
Mtr4g3892 1038 SMART C2_3c 472 574 IPR000008 -
Mtr4g3892 1038 SMART C2_3c 627 734 IPR000008 -
Mtr4g3892 1038 SMART C2_3c 311 408 IPR000008 -
Mtr4g3892 1038 SMART C2_3c 18 123 IPR000008 -
Mtr4g3892 1038 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 471 617 IPR035892 -
Mtr4g3892 1038 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 14 1038 - -
Mtr4g3892 1038 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 18 166 IPR035892 -
Mtr4g3892 1038 MobiDBLite consensus disorder prediction 154 188 - -
Mtr4g3892 1038 ProSiteProfiles C2 domain profile. 1 124 IPR000008 -
Mtr4g3892 1038 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 311 456 IPR035892 -
Mtr4g3892 1038 CDD C2C_MCTP_PRT_plant 472 615 - -
Mtr4g3892 1038 Pfam Plant phosphoribosyltransferase C-terminal 883 1038 IPR013583 -
Mtr4g3892 1038 PANTHER BNAA10G16860D PROTEIN 14 1038 - -
Mtr4g3892 1038 Gene3D C2 domain 305 437 IPR035892 -
Mtr4g3892 1038 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 626 778 IPR035892 -
Mtr4g3892 1038 Gene3D C2 domain 457 596 IPR035892 -
Mtr4g3892 1038 ProSiteProfiles C2 domain profile. 293 414 IPR000008 -
Mtr4g3892 1038 CDD C2B_MCTP_PRT_plant 311 440 - -
Mtr4g3892 1038 CDD C2A_MCTP_PRT_plant 18 148 - -
Mtr4g3892 1038 ProSiteProfiles C2 domain profile. 451 579 IPR000008 -
Mtr4g3892 1038 MobiDBLite consensus disorder prediction 273 297 - -
Mtr4g3892 1038 Gene3D C2 domain 14 177 IPR035892 -
Mtr4g3892 1038 ProSiteProfiles C2 domain profile. 609 735 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3892 Mtr-Chr4 52686078 52689800 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3892 3 1038 Lipid Metabolism Gene Families AT1G74720 70.404 0.0 1546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3892 - - gmx:100783882 1729.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3892 4 52686078 52689800 Mtr4g3892 4 52686078 52689800 ECH