Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3877 ATGATCATGAACCAAATGACAAATGGTGAGACTGTGGAGAATGAAGAGGAAAGTTTGCTGAAGAACGAAAATAGCGGAGATGATGGCCCTAAGATTAACTACAGGGGATGGAAGGTCATGCCCTTCATTATAGGAAATGAGATTTTTGAGAAGCTTGGAGCCATCGGCACTTTATCTAATCTATTGGTCTATCTTACTACGGTATTCAACTTGGAAAACATCGCAGCTACAAATATTATCAACATCTTTAACGGAAGTACCAACTTTGCAACATTGATAGGAGCTTTTTCCTCTGATGCCTTTTTTGGTCGCTACAAGACACTGTCATTCTGCACCGTGGCTTCCTTTTTGGGTTTGCTTGTAATACAACTAACAGCAGCAGTCGAGAAGCTGCATCCGCATCCATGTGAAGAATTAGAAAACACCGCATGCCAAGGGCCTACAGAGTGGCAAATGACAGTTCTAAAGACTGGTTTAGGATTATTGATGGTAGGAGCTGCAGGGATCCGACCATGTAACTTAGCATTTGGAGCCGATCAGTTTAATCCCAACACAGAATCTGGGAAAAAGGGGATCAGCAGCTTCTTCACTTGGTACTATTTCACTTTCACTCTTGCTCAGATGATATCCTTAACAATTATTGTCTACATACAGTCAAATGTGAGTTGGGCTGTCGGTTTGGGAATTCCTGCAGCTTTGATGCTTTTGTCTTCTGTAATCTTCTTCATGGGGGCCAAATTGTATGTGAAAGTTAAACCAAGTGGTAGTCCCATAACTAGCATAGTGCAAGTTATTGTTGTTGCAACAAAGAAAAGGAAGCTGAAACTCGCGGAATATCTATACCCTTCACTATTCAACTATGTACCTGCCAAGACAATGAATTCTAAACTTCCTTACACTTATCAATTCAGGTTTCTTGACAAAGCAGCAATCATGACCCCACAAGATCAAATAAATCCCAACGGATCTGCTTCTGATCCATGGAATCTATGCAGTTTGCAGCAAGTGGAAGAGGTCAAATGCTTGTTGAGAGTGTTACCCATATGGGTTTCAGCCGTATTTTACTATGTTGTTATTGTCCAACAGCACACTATTTTAGTGTTCCAAGCGCTTTTATCTGACAGGCGTATTGGGCAAAGCAAGTTCATGATCCCAGGAGCATCCTACTATGTCTTTCTGATGATCAGTGTGGCAATTTGGTTGCCCATTTACGACCGAAAAGTTGTTCCTTTACTCCAAAGGATCACTCGAAAAGAGGGTGGCATCACACTCCTTCAGAGGATGGGCATTGGCATTTTTTTGGGTATACTCAGCATGCTAGTATCTGCCATAGTTGAAGATCGTCGCAGAACTCTGGCTCTTACTAAACCCTTAGAAGTGGAATCAAGAAAAGGTGCAATTTCATCAATGTCAGGTCTGTGGCTGATTCCTCAGCTGGCATTGGCCGGACTTGCTGAAGCATTCATGTCTGTTGCACAGATTGAATTTTACTATAAACAATTTCCTGAGAACATGAGAAGCATTGCAGGATCTCTCTACTATGCGGCCCATGCAGGGGCAAGTTATTTGAGTAGTATGCTTATTTCATCTATCCACCATATCACTGTCAAATCTAAAACTGGGAGTTGGTTGCCGGAGGATCTGAACAAGGGTAGATTGGATAACTTCTATCTCATCATTGCTGCTTTAGAAATTGTAAATTTAGGCTGCTTTGTGTTATGTGCACAGTGGTATAGGTACAAAGAAACGGAAAACAGTTCAATCGAACTCGATAAAGTGATAAAACAATCTGGAAAAGATGGTAATGGTGTGAAATGA 1818 0.4142 MIMNQMTNGETVENEEESLLKNENSGDDGPKINYRGWKVMPFIIGNEIFEKLGAIGTLSNLLVYLTTVFNLENIAATNIINIFNGSTNFATLIGAFSSDAFFGRYKTLSFCTVASFLGLLVIQLTAAVEKLHPHPCEELENTACQGPTEWQMTVLKTGLGLLMVGAAGIRPCNLAFGADQFNPNTESGKKGISSFFTWYYFTFTLAQMISLTIIVYIQSNVSWAVGLGIPAALMLLSSVIFFMGAKLYVKVKPSGSPITSIVQVIVVATKKRKLKLAEYLYPSLFNYVPAKTMNSKLPYTYQFRFLDKAAIMTPQDQINPNGSASDPWNLCSLQQVEEVKCLLRVLPIWVSAVFYYVVIVQQHTILVFQALLSDRRIGQSKFMIPGASYYVFLMISVAIWLPIYDRKVVPLLQRITRKEGGITLLQRMGIGIFLGILSMLVSAIVEDRRRTLALTKPLEVESRKGAISSMSGLWLIPQLALAGLAEAFMSVAQIEFYYKQFPENMRSIAGSLYYAAHAGASYLSSMLISSIHHITVKSKTGSWLPEDLNKGRLDNFYLIIAALEIVNLGCFVLCAQWYRYKETENSSIELDKVIKQSGKDGNGVK* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3877 605 Pfam POT family 106 543 IPR000109 GO:0016020|GO:0022857|GO:0055085
Mtr4g3877 605 MobiDBLite consensus disorder prediction 1 25 - -
Mtr4g3877 605 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT 22 590 - -
Mtr4g3877 605 SUPERFAMILY MFS general substrate transporter 53 581 IPR036259 -
Mtr4g3877 605 CDD MFS_NPF1_2 40 578 - -
Mtr4g3877 605 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 22 590 IPR000109 GO:0016020|GO:0022857|GO:0055085
Mtr4g3877 605 Gene3D MFS general substrate transporter like domains 11 587 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3877 Mtr-Chr4 52540646 52544799 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3877 23 600 Organic Solute Cotransporters AT5G62680 59.107 0.0 718
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3877 - - gmx:100798182 986.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3877 4 52540646 52544799 Mtr4g3877 4 52540646 52544799 ECH