Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3869 ATGACAAAGACGACCAAAGGCGGTAAGGTGATGAACCCTACCGATGCTTATAGGAAGGAGCTTCGCAAAAAGGAATTGAAAAGGGTAAAAAAAGAAAGAAAGAAGGTGAGGGATGTGGGGATTTTGAAGAAAGATCCTGATCAACTCAAGAAGCAGATTGAGAACTTGGAAATGATGAAGGCTGATGGCGCCTTGGATAAAGCAAGAAAGCACAAAAGTAAGCAACTAAAACAAACACTTGATCTTGTCATTAAAAAGCAGAAGGAACATGATGAGAAAAGGCGGGAGAAGGGTGAGCCCCTTGTTATGTTCAGTCATTTGGGGCCTCCTCAAAGGAGAACAATTGTAGAAGAAGAAGAGATAGTTAACCCCCCACCACCACCACTACCACTTCCTGATGCTAGTTCAGCTGATGGTGCTGTTTTACCTGCATCTTTGCCACTGCCTCCCCCACCTCCCTTGCCTCCAAATCCCACTGCTGTGGTGCCTGCATCATTACCACCACCTCCTTTGCCGCCACCACCTTCTGGTTCTCCACCCAAAGAGCAAGCTGTAAATCGGCCTTTACCCCCTCCTCCTCCTCCACCTCTAAAACAGTCTCAGCCACCTCCACCTGGCACCAGTGAAGGCGAAGAGAGAAATCAGTATGCATTGCCAGATAATCTATCTTCCAAGGAGCCTGGTCAGGTGCATCTTCCTCCGCCGCCTCCTCCACCAAGTTGTATGCCACCAAATTCTGGTGCTATTCAGTCTGATGGTACTGACAATAAGAATTATTATTCAAACCAGGAGATCCAAAAATTGTTTCCTGGGCCTCCTCCTCCAAGACAACAACCTCCTGGTCCAGGACCCTCATTAATCCCAAGTTTACAGCCTGATGTATTGCCCCCTGGAATATCTCGATTCCCACCACCCCCACCACCACCTGATATGAGGCCGCCTTTACCTGTGACTGGACTTCCTGGTCAGGCACCTCCTCCTGGAATGATGGTCCCCCTGATCCCAAGGCCTCCATATGGTCCTCCACCTGGGCCTCCTCCAATGATGAGACCGCCACTTCCACCTGGTCCTCCTCCAAACTTTCAGGAAGAGGATCATATGGCAAGTAAGGCACTTCCTCCTCAGAAACCATCATATGTTAAATCTGCTGCTTCTACTGTTGTTAAAAGGCCATTAGCTCAGCACACTCCAGAACTCACATCTATGGTTCCTGCATCTGTGCGGGTGAGAAGGGAGACCGCAGTGACCAAAACAAAACCAAAACCACTTGTGTCAACAGTGTCAGTGGCAACATCTAGAACAGTCCCTGTGACACTCGGGCCAACTATTGTAAAACCAGAATCAGTGAGCTCGTCATCTTCTCCAAAAGCACCAAGCATTGATGACTCGTACACAGCTTTCTTAGAGGACATGAAAGCCCTTGGCGCACTTGATGGTTGA 1440 0.4868 MTKTTKGGKVMNPTDAYRKELRKKELKRVKKERKKVRDVGILKKDPDQLKKQIENLEMMKADGALDKARKHKSKQLKQTLDLVIKKQKEHDEKRREKGEPLVMFSHLGPPQRRTIVEEEEIVNPPPPPLPLPDASSADGAVLPASLPLPPPPPLPPNPTAVVPASLPPPPLPPPPSGSPPKEQAVNRPLPPPPPPPLKQSQPPPPGTSEGEERNQYALPDNLSSKEPGQVHLPPPPPPPSCMPPNSGAIQSDGTDNKNYYSNQEIQKLFPGPPPPRQQPPGPGPSLIPSLQPDVLPPGISRFPPPPPPPDMRPPLPVTGLPGQAPPPGMMVPLIPRPPYGPPPGPPPMMRPPLPPGPPPNFQEEDHMASKALPPQKPSYVKSAASTVVKRPLAQHTPELTSMVPASVRVRRETAVTKTKPKPLVSTVSVATSRTVPVTLGPTIVKPESVSSSSSPKAPSIDDSYTAFLEDMKALGALDG* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3869 479 MobiDBLite consensus disorder prediction 268 361 - -
Mtr4g3869 479 PANTHER WW DOMAIN-BINDING PROTEIN 11 2 478 IPR019007 GO:0006396
Mtr4g3869 479 MobiDBLite consensus disorder prediction 144 203 - -
Mtr4g3869 479 MobiDBLite consensus disorder prediction 229 244 - -
Mtr4g3869 479 MobiDBLite consensus disorder prediction 84 384 - -
Mtr4g3869 479 MobiDBLite consensus disorder prediction 84 101 - -
Mtr4g3869 479 PANTHER WW DOMAIN-BINDING PROTEIN 11 2 478 - -
Mtr4g3869 479 Pfam WW domain binding protein 11 8 84 IPR019007 GO:0006396
Mtr4g3869 479 PRINTS Proline rich extensin signature 127 143 - -
Mtr4g3869 479 PRINTS Proline rich extensin signature 149 161 - -
Mtr4g3869 479 PRINTS Proline rich extensin signature 163 184 - -
Mtr4g3869 479 PRINTS Proline rich extensin signature 188 204 - -
Mtr4g3869 479 PRINTS Proline rich extensin signature 223 248 - -
Mtr4g3869 479 MobiDBLite consensus disorder prediction 245 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3869 Mtr-Chr4 52423199 52429460 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3869 - - mtr:MTR_4g107420 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3869 4 52423199 52429460 Mtr4g3869 4 52423199 52429460 ECH