Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3865 ATGTTTTCCTACAAAATGACTGAAATGTGGACAACAATGGGATCAACCTTAGCAAGTTTCATGTTCATTTGGGCTATCATAAGACAATATTGTCCATACCAACTTCTACGTTTCTTTGAAAAATACAGTCACAGAATCATGGACTACTTCTATCCTTACATAAGAATTTCATTCCATGAATTCTTAGGTGACAGACTCAAAAGAAGTGATGCTTATGGAGCTGTTGAAGCTTATCTCAGTGCTAACACTTCAAAGAGTGCAAAGAGACTCAAAGCCGAGATTGGAAAAGATAGCACCAACTTGGTTTTAACCATGGATGAATATGAAAGAGTAACTGATGATTATAAAGGTGTCAAGGTTTATTGGGTTTGTAGCAAAGTTATGTCACAATCAAGATCCATGCCTTATTATCAAGAACAAGAGAAGAGATTCTACAAACTCACTTTTCATAAAAAGTATAGAGATACAATAACTGGTTCATATTTGGATCATGTGATGAAAGAAGGGAAAGAGATTCGTTTGAGGAACAGACAGAGGAAATTGTATACAAACAGTCCTGGTTACAAATGGCCTAGCTATAAGCAAACTATGTGGAGTCACATTGTTTTTGAACATCCTGCAACTTTTGAAACAATGGCTATGGAACCTCAGAAGAAGAAAGAGATTATTGAAGATTTGGTTACTTTTAGTAAAAGTAAGGATTTTTATGCTAGGATTGGTAAAGCTTGGAAAAGGGGTTATTTACTTTTTGGTCCTCCAGGTACTGGTAAATCAACAATGATTGCTGCTATGGCTAATTTGTTGGGTTATGATGTTTATGATTTAGAGTTAACAGCAGTGAAGGATAATACTGAGTTGAGGAAGCTTTTGATTGAGACTACAAGTAAGTCAATTATTGTTATTGAAGACATTGATTGTTCACTTGATCTTACAGGTCAAAGGAAGAAAAAAGGTGAAAGTAAGTTTTTTTCTGATGATGAGAATGAAAATAAGGCTAATTTTGATGCTGTGAGGAAGGAGGTGAAGGAAGAAGGAAGTGGTAGTGGTAGTGGGGGTGGGAATAGCAAAGTGACACTTTCAGGGCTATTGAATTTCATTGATGGTATATGGTCAGCTTGTGGAGGTGAAAGGTTAATTGTTTTCACAACAAATTATGTGGAGAAGCTTGATCCTGCACTTATAAGGAGGGGTAGAATGGACAAACATATTGAACTTTCTTATTGTAGTTTTAATGGTTTTAAAGTGCTTGCTAATAATTACTTAAGGGTTGAGAATCATGCATTGTTTGAGAGTATTGAGAGGCTAATTGGTGAAGTGAAGATTACACCTGCTGATGTTGCTGAGAATCTTATGCCTAAGTCTCCAATGGATGATGCTGATAAGTGTCTTTCAAATTTGATTGAAGCTCTTTCTGATAAAAAAGCTGAGGAGGTAAAAAAGAGTAGTGGTTTAATTAATGAACAAGATGAGGAAGTGGAACATTTTAGTCCTATTAAGGAAAATGGTGAGGTTGTTGGTGATGAGAAAGAAGATGATCAAGCAATGAAGCAAATTCAGAGGTAG 1563 0.357 MFSYKMTEMWTTMGSTLASFMFIWAIIRQYCPYQLLRFFEKYSHRIMDYFYPYIRISFHEFLGDRLKRSDAYGAVEAYLSANTSKSAKRLKAEIGKDSTNLVLTMDEYERVTDDYKGVKVYWVCSKVMSQSRSMPYYQEQEKRFYKLTFHKKYRDTITGSYLDHVMKEGKEIRLRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFETMAMEPQKKKEIIEDLVTFSKSKDFYARIGKAWKRGYLLFGPPGTGKSTMIAAMANLLGYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGESKFFSDDENENKANFDAVRKEVKEEGSGSGSGGGNSKVTLSGLLNFIDGIWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCSFNGFKVLANNYLRVENHALFESIERLIGEVKITPADVAENLMPKSPMDDADKCLSNLIEALSDKKAEEVKKSSGLINEQDEEVEHFSPIKENGEVVGDEKEDDQAMKQIQR* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3865 520 Pfam Domain associated at C-terminal with AAA 32 124 IPR025753 -
Mtr4g3865 520 Gene3D - 403 470 - -
Mtr4g3865 520 PANTHER ATP BINDING PROTEIN 7 491 - -
Mtr4g3865 520 SMART AAA_5 243 409 IPR003593 -
Mtr4g3865 520 PANTHER BCS1 AAA-TYPE ATPASE 7 491 - -
Mtr4g3865 520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 455 IPR027417 -
Mtr4g3865 520 MobiDBLite consensus disorder prediction 477 520 - -
Mtr4g3865 520 Gene3D - 203 402 IPR027417 -
Mtr4g3865 520 Pfam ATPase family associated with various cellular activities (AAA) 248 406 IPR003959 GO:0005524|GO:0016887
Mtr4g3865 520 ProSitePatterns AAA-protein family signature. 377 396 IPR003960 GO:0005524|GO:0016887
Mtr4g3865 520 CDD AAA 244 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3865 Mtr-Chr4 52383439 52385408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3865 220 422 Miscellaneous Gene Families AT5G53170 27.094 9.66e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3865 - - gmx:100798981 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3865 4 52383439 52385408 Mtr4g3865 4 52383439 52385408 ECH