Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3864 ATGAAGAGAGCGAGAACAACAACAAAGGTAACATCTTTGTTCTCCTCTCTTTGTAAGCAACGATCCTTTCAAATTCTCATCATCATCGCTGTTCTCTATGTTCTTCTTTTCACTCTTGAAATCCCTTTTGTTTTCAACAAAACCGCCGTAACTCGCTCCGAAAGACACGTTCTCGAACAACAACAACAGCTACAACCTAGTACCCATCAAAAAGCTGATTCGATTCTCTCTAGTTTGATTCTAAACGACGCCGCATTCGATTCCAAAGAGTATCAATTATCGGTCAAAGATGGAAAACGCGTTTGGAATGAACTTCAATCTGCAAAAACGCAAACCCCAATTCAAACCGCTCCGAAACCCGAGAAACGACCCGGGTCATGTCCTCGATCGGTCTCGGTTACCGGGTCGGAGTTTGCGGCGAATGGGAGTTTGATGGTGATTCCATGTGGGTTGACGTTAGGGTCGCATATAACGGTGGTTGGAAAACCGTTGAGTTCGGAAGGGAAAAATCACTTTTTTTTGGAGTTGCAGGGTTTGAAAACGGTGGAAGGTGAAGACCCACCAAGGATTTTGCATTTCAATCCAAGGTTGAAAGGGGATTGGAGTGGGAAGCCTGTTATTGAGCTTAACTCTTGTTATAGGATGCAGTGGGGTACTTCTTTGAGATGTGATGGTTGGAAATCAAGGGCTGATCAAGACACTGTCGATGGGCAGGTGAAGTGCGAGAAGTGGATTGGGGGAGATGATAGGCAAGCAGAGGAGTTTGTATCAAAATGGTGGTTGAATAGATTCGTAGGTCGGCCGAAAAAAGTAACAGTTGATTGGCCATTCCCATTTAATGAGGACAAGCTATTTGTTCTTACTGTTAGTGCTGGATTGGAGGGCTATCATTTTAATGTTGATGGGAGGCATGTGGTCTCGTTTCCTTATCGCACTGGCTTTACTCTTGAGGATGCTACTGGACTCACTGTACATGGAGATATTGATGTCCATTCTATATTTGCTGCCTCCTTGCCTTCAACGCATCCTAATATTTCTCCACAACAGCATCTTGAATTTTCAGCCAGATGGCGTGCCCCACCACTACCTAAGTTTGGTGTGGAATTGTTCATCGGCATCCTATCAGCTGGAAACCATTTCGCTGAGCGGATGGCTGTAAGAAAGTCGTGGATGCAGCATAGCCTTATCAAATCTTCAGAAGTGGTGGCTCGTTTCTTTGTAGCACTGCACCCGAAAATAGAAATTAATGCAGAGTTGAAGAAGGAAGCAGAATATTTTGGAGATATTGTTATAGTGCCTTACATGGATAAGTATGACCTTGTTGTGTTGAAAACAGTGGCTATATGTGAATATGGGGTTAATAGAGTATCTGCGGCATACATCATGAAAGGTGATGATGACACATTTGTTAGAGTGGATGCTGTTATAGACGAAGTAAGGAAGGTTCCAGATTCTATGGGTGCTTATATTGGGAATATAAATTATCACCACAAACCTTTGCGCTATGGTAAATGGGCTGTGACATACGAGGAGTGGCCAGAAGAGGATTACCCACCATATGCTAATGGACCGGGGTATATTCTGTCTTATGATATCGCACACTACATTGTTTCTGAATTTGAGAAGCATAAATTACGGTTGTTTAAAATGGAAGATGTGAGTATGGGAATGTGGGTAGAGCAATTTAACAGCACGATATCGGTACACTATTCTCATAGCTTAAGATTCTGCCAGTTTGGATGTATAGAAGGCTATTACACAGCTCATTACCAATCTCCAAGGCAGATGATGTGCCTTTGGGATAAATTGCAGCGGCATACAAGTCCTCAATGCTGCAACATGAGGAGATAA 1851 0.4306 MKRARTTTKVTSLFSSLCKQRSFQILIIIAVLYVLLFTLEIPFVFNKTAVTRSERHVLEQQQQLQPSTHQKADSILSSLILNDAAFDSKEYQLSVKDGKRVWNELQSAKTQTPIQTAPKPEKRPGSCPRSVSVTGSEFAANGSLMVIPCGLTLGSHITVVGKPLSSEGKNHFFLELQGLKTVEGEDPPRILHFNPRLKGDWSGKPVIELNSCYRMQWGTSLRCDGWKSRADQDTVDGQVKCEKWIGGDDRQAEEFVSKWWLNRFVGRPKKVTVDWPFPFNEDKLFVLTVSAGLEGYHFNVDGRHVVSFPYRTGFTLEDATGLTVHGDIDVHSIFAASLPSTHPNISPQQHLEFSARWRAPPLPKFGVELFIGILSAGNHFAERMAVRKSWMQHSLIKSSEVVARFFVALHPKIEINAELKKEAEYFGDIVIVPYMDKYDLVVLKTVAICEYGVNRVSAAYIMKGDDDTFVRVDAVIDEVRKVPDSMGAYIGNINYHHKPLRYGKWAVTYEEWPEEDYPPYANGPGYILSYDIAHYIVSEFEKHKLRLFKMEDVSMGMWVEQFNSTISVHYSHSLRFCQFGCIEGYYTAHYQSPRQMMCLWDKLQRHTSPQCCNMRR* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3864 616 Gene3D - 143 334 - -
Mtr4g3864 616 SUPERFAMILY Concanavalin A-like lectins/glucanases 145 334 IPR013320 -
Mtr4g3864 616 MobiDBLite consensus disorder prediction 107 130 - -
Mtr4g3864 616 Pfam Galactoside-binding lectin 144 334 IPR001079 GO:0030246
Mtr4g3864 616 SMART Gal_bind_lectin_2 147 335 IPR001079 GO:0030246
Mtr4g3864 616 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE GALT5 11 53 - -
Mtr4g3864 616 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE GALT5 80 615 - -
Mtr4g3864 616 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 11 53 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mtr4g3864 616 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 80 615 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mtr4g3864 616 CDD GLECT 147 334 IPR001079 GO:0030246
Mtr4g3864 616 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 143 336 IPR001079 GO:0030246
Mtr4g3864 616 Pfam Galactosyltransferase 382 562 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mtr4g3864 616 Gene3D - 366 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3864 Mtr-Chr4 52372263 52376672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3864 13 615 Glycosyltransferase AT1G74800 61.760 0.0 829
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3864 K20843 - gmx:100800292 920.228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3864 4 52372263 52376672 Mtr4g3864 4 52372263 52376672 ECH