Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3861 ATGGCGACTCGATCATTTATTCGTTTTGTTGAGAGAAATATAGGAAAGTTCCCACACTTTCTGTTGTGCATGATGCTTGAGTGGGTGTTGATAATTTCCTTGTTCATTGATGGGCTTCTAGCATTTTTCATCACAGAATTTGCAAGGTTTTTTGATTTGGAAATTCCATGTTGGCTATGCGCAAAGATGAATCATTTTCTTACTCACAAGACTCCTAATTTTTATTACAACAGTTCCATGTGTGAGGCTCATAAGAAAGACGTTTCGTCTTTGGCATTTTGTTATAATCACAAGAAACTTTCTGATACAAGGAAGATGTGTGAAGGGTGTTTGCTTTCATTCGCAACGCAGAAGGAATCAAATTGTGATACCTATAAGTCTCTTGTAGGGATTTTGAATAAGAATTTGGATTGCTTTGTTGAAGATAGTGGAAACATACAATTAAGTTTGAAGGATGAAGGAGTTATACAGGTCGAGAAAAATGGTACTCAAAAGTGTTCATGTTGTGGAGCACCGTTGAAACTCAAGTCTTCCATATCTAAAAGAAAGAATTTAGTTTCAAATTTACAAGCTCCAACCGCTTCGCCACGAGCTCATCCATTCATCGCGTCAAAATGCGAGGAATCTCGTGGTACAGAATCACCTCGAATATTGAACGCAAAAAAAGATTATGAGCTTCAGCAAAATGAGGATGACAATGACAACAACTTGAAAAATCAGAGTTTAGAATTAAAAGAAGTAAACAAAGGTGCCTTTTGGCCTCTATTGACAGGGTCCGACGATATAAACGTAGAATCCCCCAAAACCCCATCTTTTCCATGGGGCAGCAGGTTCTTTGGAGTCCCACCTACAGATTCTCCAAACAACAGTCCAAGATGGTCTTCTTTGTCTTCTGTCTCGGGCAAGAAATCACCATTAGAAAAGATGGAATCTACATCTGACTCTACTGAGGGGAATTGTCAAGATGAAGAAGTCGATGCCGTCTTAAATAATTTGAAGAGGCAAGTTCGTTTGGATCGCAAGTCGCTCATGGCTTTGTACATGGAGTTGGATGAAGAGAGAAGTGCTTCAGCTGTTGCTGCCAACAATGCTATGGCAATGATCACCCGCTTGCAGGAAGAGAAGGCAACTTTGCATATGGATACTTCACAATATCAAAGAATGATGGAGGAGCAAATAGAGTATGATGAAGAAGTCTTGCAAGAAACTAATGAATTACTTCTTAAACTAGAAGAAGAAGTCAAAACTTTAGATGCTGAATTGGAGATTTATAGAGATAAATATGGATGTTTGACAGAAGATGATATTAAGGCTCATGGTGGCAATAACTTCCCATTTAGGTCCGTTGAAGGCGAGGATGATGTGGAAAAAGACCTTGATCTTGGTCAACCTGATTCATCGAAGGCAAATAATGGAGGGGGAAAGTTCAAGGAATCACTAAAAGATTTTAGAATGGAGAAAACATATCTTCTTGCGCGGAAGAAAATGGAAAATGGATATCCCTTGACAGAGAATTGA 1518 0.3887 MATRSFIRFVERNIGKFPHFLLCMMLEWVLIISLFIDGLLAFFITEFARFFDLEIPCWLCAKMNHFLTHKTPNFYYNSSMCEAHKKDVSSLAFCYNHKKLSDTRKMCEGCLLSFATQKESNCDTYKSLVGILNKNLDCFVEDSGNIQLSLKDEGVIQVEKNGTQKCSCCGAPLKLKSSISKRKNLVSNLQAPTASPRAHPFIASKCEESRGTESPRILNAKKDYELQQNEDDNDNNLKNQSLELKEVNKGAFWPLLTGSDDINVESPKTPSFPWGSRFFGVPPTDSPNNSPRWSSLSSVSGKKSPLEKMESTSDSTEGNCQDEEVDAVLNNLKRQVRLDRKSLMALYMELDEERSASAVAANNAMAMITRLQEEKATLHMDTSQYQRMMEEQIEYDEEVLQETNELLLKLEEEVKTLDAELEIYRDKYGCLTEDDIKAHGGNNFPFRSVEGEDDVEKDLDLGQPDSSKANNGGGKFKESLKDFRMEKTYLLARKKMENGYPLTEN* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3861 505 MobiDBLite consensus disorder prediction 282 318 - -
Mtr4g3861 505 Coils Coil 393 427 - -
Mtr4g3861 505 Pfam Zein-binding 331 421 IPR007656 -
Mtr4g3861 505 PANTHER MYOSIN-BINDING PROTEIN 2 1 495 IPR039306 GO:0017022
Mtr4g3861 505 PANTHER MYOSIN-BINDING PROTEIN 6-RELATED 1 495 - -
Mtr4g3861 505 MobiDBLite consensus disorder prediction 275 320 - -
Mtr4g3861 505 MobiDBLite consensus disorder prediction 441 479 - -
Mtr4g3861 505 ProSiteProfiles GTD-binding domain profile. 327 425 IPR007656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3861 Mtr-Chr4 52338299 52340050 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3861 - - lja:Lj4g3v1598220.1 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3861 4 52338299 52340050 Mtr4g3861 4 52338299 52340050 ECH