Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3851 ATGTCGTCACCGCAGAACGTAAAACAAAAGGTATTCACATGTCTAACCAAACTCTCCGACCGCGACACTCACTCCCTCGCCGCAACAGAACTCATCACAATTGCACGTAACCTCGACACAACCACCGTACCGGTTTTCCTCTCTTGCATGTACTCCACCGACGCTTCCGATAAATCTCCGGTACGGAAGCAATGCGTCCAGCTTTTCGGATTACTCTCCGAAACTCACGGTAACACGCTTTCTCCTTACCTGTCGAAGATCCTCGCCAACGTAATTCGACGGCTTCGTGATACCGACTCGTCGGTCCGATCCGCGTGTGTGAATTCCGTTTCAGCATTATCTTGCCACGTCACGAAGCAACCGTTTTATACCTTTCTGAAACCGTTATCGGAAGCTCTGTTCACCGAGCAAGAACAGAACGCGCAAATTGGCGCTGCACTTTGTCTTGCTTCCGCGATCGACGGAGCTCCGGATCCAGAACCTGCTAGATTAGCGAAGCTGTTGCCGAAGTTCCAGAAGCTTCTTAAGCGTGAAGTGTTTAAGGCGAAACCGGCATTATTGACGCTGATCGGAAGTGTTGTTGAAGCTGGTGGCGCGTCTGGTCACGCTTCTTTGAAGAATTTGGTTCCGTGTTTGGTGGAATCGTTGAGCAATCGTGATTGGGCGGTGAGGAAAGCTGCGGCGGAGACGCTGGTGGTTTTGGCTAACGTGGAGAGGGATTTCTTGTCAGAATTCAAGGCTGATTGTATGAAAGTTTTCGATAATCGACGATTTGATAAGGTGAAGTTAGTTCGTGAAGTTATGAATCAGATGTTGGAAGCATGGAAGCATATCCCTGATGTTTCTGATGATTTTTCGCCACCTCCGAAATCGCAATCTTCCTCTAAAGAGAATGCGAGTGATGGGCGGTATCCTCCGGTGTCTCAAAATTCATGTAATCCTGGTTCAGTAATGGCGAATCTAAGGAGGAGATCAGCTCCTGTTAACAGATTCAGTCCACCAGATAGTTCTACTGCTAGCAATGGCAAGAATGTGAGTTCCTTAAGTAGTAATAAGAGAAGGAGTTTGGGTGTTTCGCGAAAATTAAACCAAAAGAATTGGGATGTTCAAGTGGCCATGGCTGATCAGGGTGAACTCCAGGAGAGGGATGAAAATGGAACTCCTTTGGAAACAAGCAAAGTGGATAAAAGCAGATTTCTAAAGCCAGAAATGAATCGAGCACTATTAAATAAAAATTCTGATGATAGAATAAAAAAGCATGGTGGATCTCGTGTGGTTCCGTATCATGAAGAGAGTCAGGACTCAGTTCCTGTCAATAATGTTTCCAAAGATCTTTTTAAGAATGATAAAGAGAGTGAAGAGTTATCTTTGATCCGCAACCAGTTGCAACAAATCGAGAAGCAACAGTCGAGTCTACTTGATCTTCTGCAGAAATTCATTGGAAGCTCACAAAATGGAATGCGATCTTTAGAGACCCGTGTACATGGCCTTGAGTTGGCATTGGATGACATCTCTTATGATTTGGCTGTATCAAATGGAAGGATGACTAATTCTAATGTCCCTCGTAATTCATGTTGCTTGCTACCTGGAGCAGATTTTTTGAGCTCTAAATTCTGGAGGAAAACACAGGGCCAGTATTCATCTCCGCAGTTCTCTCGACGTGGTGGTGCTCCATCACTTGCTACCACGCACTACACAGCTGGCAGGAATGCTGAAACTAATTTTACAAGCCAGAGATTCAGGCTTGATGGAGGTTTTATCACTAATCCTCTGGCAGAGGTACACACTAATTCAAGGAACTTTGCTTGA 1809 0.4538 MSSPQNVKQKVFTCLTKLSDRDTHSLAATELITIARNLDTTTVPVFLSCMYSTDASDKSPVRKQCVQLFGLLSETHGNTLSPYLSKILANVIRRLRDTDSSVRSACVNSVSALSCHVTKQPFYTFLKPLSEALFTEQEQNAQIGAALCLASAIDGAPDPEPARLAKLLPKFQKLLKREVFKAKPALLTLIGSVVEAGGASGHASLKNLVPCLVESLSNRDWAVRKAAAETLVVLANVERDFLSEFKADCMKVFDNRRFDKVKLVREVMNQMLEAWKHIPDVSDDFSPPPKSQSSSKENASDGRYPPVSQNSCNPGSVMANLRRRSAPVNRFSPPDSSTASNGKNVSSLSSNKRRSLGVSRKLNQKNWDVQVAMADQGELQERDENGTPLETSKVDKSRFLKPEMNRALLNKNSDDRIKKHGGSRVVPYHEESQDSVPVNNVSKDLFKNDKESEELSLIRNQLQQIEKQQSSLLDLLQKFIGSSQNGMRSLETRVHGLELALDDISYDLAVSNGRMTNSNVPRNSCCLLPGADFLSSKFWRKTQGQYSSPQFSRRGGAPSLATTHYTAGRNAETNFTSQRFRLDGGFITNPLAEVHTNSRNFA* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3851 602 Pfam HEAT repeat 208 236 IPR000357 GO:0005515
Mtr4g3851 602 PANTHER TORTIFOLIA1-LIKE PROTEIN 3 4 600 - -
Mtr4g3851 602 MobiDBLite consensus disorder prediction 375 399 - -
Mtr4g3851 602 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 4 600 IPR033337 GO:0005874|GO:0008017
Mtr4g3851 602 Gene3D - 3 374 IPR011989 -
Mtr4g3851 602 ProSiteProfiles HEAT repeat profile. 208 237 IPR021133 -
Mtr4g3851 602 Coils Coil 448 468 - -
Mtr4g3851 602 SUPERFAMILY ARM repeat 4 275 IPR016024 -
Mtr4g3851 602 MobiDBLite consensus disorder prediction 279 361 - -
Mtr4g3851 602 MobiDBLite consensus disorder prediction 377 399 - -
Mtr4g3851 602 MobiDBLite consensus disorder prediction 330 361 - -
Mtr4g3851 602 MobiDBLite consensus disorder prediction 286 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3851 Mtr-Chr4 52213834 52217118 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3851 - - gmx:100789197 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3851 4 52213834 52217118 Mtr4g3851 4 52213834 52217118 ECH