Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3842 ATGGTACTACTTTTCAATAACTTGCAGTTTTCTCGGTGGACATTCTTCAAACACCTTACGCCCCGGAAATACACTACTCTCTGTCAGAACAATTCCACATCCAATCTCTCCCATTTCCTAACCCTAACCTCTCGCCAGAAAGACCAAATTCATCTCTACGTTGACACACTTCTTCAATGGAACAAGCGCATGAATCTAACTGCAGTTAAAGAAGTGAATGAAGTTATGGAAAGACACATTGAGGACTCCCTCGCGATTTTGCCTCCGTTGAGCGATAATTATATGAGTCATAGCAGCAAATCCATTGATAAGGTTAAACTCGTTGATGTAGGAACTGGTGCAGGTCTTCCGGGAGTAGTTTTGGCCATTGCTCGACCAGATTGGGATGTAACACTGATGGAGTCTATGAACAAGCGGTGCGTTTTCTTGGAGCACGTTGTGGGTGTTATCGGTTCCTCCAACCTTCAAATTGTAAGAGGAAGAGCAGAGAGTTTGGGGCAGAATCTTTGCTACAGAGAGAAATTTGACATAGCTGTAGCCAGGGCGGTTGCAGAGACGAGAGTATTAGCTGAGTATTGTCTACCGTTGGTTCGTGTTGGGGGAATGTTTATTGCTGCCAAGGGTCATGATCCTGAGGATGAAGTTAAGAAAGCTGAAAACGCCATCAAGAAAATGGGGGCATCATTATTGCAAGTATGCTCAGTGGAATCGCAAAGCCCATATGGTCAGCGTACTGCTGTCATATGTCTGAAGGATCGTCCCACCCCAATGAAATATCCCCGTTTTCCTGGGACACCAAGTAAAGAACCATTGTAA 816 0.4473 MVLLFNNLQFSRWTFFKHLTPRKYTTLCQNNSTSNLSHFLTLTSRQKDQIHLYVDTLLQWNKRMNLTAVKEVNEVMERHIEDSLAILPPLSDNYMSHSSKSIDKVKLVDVGTGAGLPGVVLAIARPDWDVTLMESMNKRCVFLEHVVGVIGSSNLQIVRGRAESLGQNLCYREKFDIAVARAVAETRVLAEYCLPLVRVGGMFIAAKGHDPEDEVKKAENAIKKMGASLLQVCSVESQSPYGQRTAVICLKDRPTPMKYPRFPGTPSKEPL* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3842 271 Pfam rRNA small subunit methyltransferase G 47 236 IPR003682 GO:0005737|GO:0006364|GO:0008649
Mtr4g3842 271 TIGRFAM rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 52 243 IPR003682 GO:0005737|GO:0006364|GO:0008649
Mtr4g3842 271 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 1 271 IPR003682 GO:0005737|GO:0006364|GO:0008649
Mtr4g3842 271 Hamap Ribosomal RNA small subunit methyltransferase G [rsmG]. 39 248 IPR003682 GO:0005737|GO:0006364|GO:0008649
Mtr4g3842 271 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 36 271 IPR029063 -
Mtr4g3842 271 Gene3D Vaccinia Virus protein VP39 22 271 IPR029063 -
Mtr4g3842 271 CDD AdoMet_MTases 106 201 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3842 K03501 - gmx:100818428 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3842 4 52111307 52116647 Mtr4g3842 4 52111307 52116647 ECH