LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr4g3823	ATGTCACCGGTGCCTACATTTATAAAAATATGCAAGGCAAAATCAGTGCAAGATTTCAAACCAGATCCGTATGTGGTAACTATACTCAATTGTGCAATGTGGTCATTCTATGGAATGCCCTTCATTAGTAAAAGTAACACTCTTGTCCTCACAATTAATGGCTTTGGCTTCTTCATTGAGATTATCTACACTTCCATCTTCTTCGTATACTCAAATGGGAGTAAGCGTAAGAAGATCTTGTTGGCCCTTCTAGCTGAAGTTGTATTCCTTGTCTTAGTGGTATTTATTGTCATGTATTTTGTTACCAACCTTAAAGAGAGAAGGTTCATTGTTGGAGTTATATGCATAATCTTTAACATCCTTATGTACTTTTCACCCTTGACTGTCATGCGTCAAGTAATTAGATCGAAGAGTGTGAAGTACATGCCATTCTTACTCTCACTAGCCAACTTTGCCAATGGGCTTATTTGGACGACTTATGCACTTCTTAGATGGGATCCATTCGTAGTGATTCCGAATGGATTGGGAGCACTTTCTGGATTGGCTCAGCTCATCCTTTATGCCGTTTACTACCGAACAACAAAGTGGGACGATGATGCTCCACCTAGTAGTGTCAACAATGTATGA	627	0.3939	MSPVPTFIKICKAKSVQDFKPDPYVVTILNCAMWSFYGMPFISKSNTLVLTINGFGFFIEIIYTSIFFVYSNGSKRKKILLALLAEVVFLVLVVFIVMYFVTNLKERRFIVGVICIIFNILMYFSPLTVMRQVIRSKSVKYMPFLLSLANFANGLIWTTYALLRWDPFVVIPNGLGALSGLAQLILYAVYYRTTKWDDDAPPSSVNNV*	209

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr4g3823	208	Pfam	Sugar efflux transporter for intercellular exchange	110	194	IPR004316	GO:0016021
	Mtr4g3823	208	Pfam	Sugar efflux transporter for intercellular exchange	2	72	IPR004316	GO:0016021
	Mtr4g3823	208	PANTHER	BIDIRECTIONAL SUGAR TRANSPORTER SWEET5	1	204	-	-
	Mtr4g3823	208	Gene3D	-	1	77	-	-
	Mtr4g3823	208	Gene3D	-	107	195	-	-
	Mtr4g3823	208	PANTHER	RAG1-ACTIVATING PROTEIN 1	1	204	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr4g3823	Mtr-Chr4	51949734	51951628	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr4g3823	2	171	Miscellaneous Gene Families	AT5G62850	53.529	5.40e-72	216

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr4g3823	K15382		-	gmx:100810948	304.679

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr4g3823	4	51949734	51951628	Mtr4g3823	4	51949734	51951628	ECH