Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr4g3806 | ATGCAATCGTTATCATTAAGCAGTACGAAGAGTTTGGCGGGTTTGCGGTTGATGAGTCAAGAAGCGAGAGTGAAGAGAAGGGGTGGCAATAGCAATAACATGGTGGTGGCATGTGGTAATAATTCGGATAAAGATACTGCTCCAAGTTCAACCTCATTTCTATCTCGGACTCAAACATATGCTCTTTTGAAACAACAAATGGAAGTAGCTGCTAAATCCGAGGATTACAAGGAAGCTGCTAGAATTCGAGATTCACTTAAGTTATTTGAAGAAGAGGAACCTGTTTTGCGTTTAAGGAGGCTAATTAAGGAAGCAATTGCTGATGAGAGATTCCAGGATGCAGCTAGTTATCGTGATGAGCTAAAAAGAATTGCTCCACACTCTTTTTTAAAATGTTCCAGTGATGCTACAACACTGGGAGTCAGGGTTCAAGTCAGGAGTGTATATATAGAGGGAAGAAGTCAGCCTTCGAAGGGGCTATACTTTTTTGCATATAGAATAAGAATTACCAATAACTCAGATGACACCGTTCAACTTCTTAGAAGGCACTGGATCATAACCGATGCCAACGGGAGATCAGAAAATGTACGGGGGATTGGAGTTGTTGGTGAACAGCCAGTACTTCTTCCCAGAACTAGTTTTGAGTACTCCTCTGCATGCCCATTAAGCACACCAAATGGTAGAATGGAAGGTGAATATGAGATGATCCATGTTGATAAAGTAGGTTCACCTTCATTTAATGCGATCATTGCCCCATTTTCTCTCGCTCTGCTTGGAGATGATGACTGCAATACCATTTGA | 801 | 0.4157 | MQSLSLSSTKSLAGLRLMSQEARVKRRGGNSNNMVVACGNNSDKDTAPSSTSFLSRTQTYALLKQQMEVAAKSEDYKEAARIRDSLKLFEEEEPVLRLRRLIKEAIADERFQDAASYRDELKRIAPHSFLKCSSDATTLGVRVQVRSVYIEGRSQPSKGLYFFAYRIRITNNSDDTVQLLRRHWIITDANGRSENVRGIGVVGEQPVLLPRTSFEYSSACPLSTPNGRMEGEYEMIHVDKVGSPSFNAIIAPFSLALLGDDDCNTI* | 267 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr4g3806 | 266 | SUPERFAMILY | ApaG-like | 137 | 256 | IPR036767 | - | |
| Mtr4g3806 | 266 | ProSiteProfiles | UVR domain profile. | 92 | 127 | IPR001943 | GO:0005515 | |
| Mtr4g3806 | 266 | ProSiteProfiles | UVR domain profile. | 57 | 92 | IPR001943 | GO:0005515 | |
| Mtr4g3806 | 266 | PANTHER | OS05G0170800 PROTEIN | 7 | 262 | - | - | |
| Mtr4g3806 | 266 | ProSiteProfiles | ApaG domain profile. | 135 | 262 | IPR007474 | - | |
| Mtr4g3806 | 266 | Pfam | ApaG domain | 153 | 236 | IPR007474 | - | |
| Mtr4g3806 | 266 | SUPERFAMILY | C-terminal UvrC-binding domain of UvrB | 58 | 90 | IPR036876 | - | |
| Mtr4g3806 | 266 | Gene3D | ApaG domain | 131 | 261 | IPR036767 | - | |
| Mtr4g3806 | 266 | Hamap | Protein ApaG [apaG]. | 134 | 264 | IPR023065 | - | |
| Mtr4g3806 | 266 | Pfam | UvrB/uvrC motif | 63 | 91 | IPR001943 | GO:0005515 | |
| Mtr4g3806 | 266 | Pfam | UvrB/uvrC motif | 97 | 124 | IPR001943 | GO:0005515 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr4g3806 | - | K06195 | lja:Lj4g3v1476200.1 | 393.66 |
Event-related genes