Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3804 ATGGCCAACACAAACGACGCCGGCGTAGAAGCCCTACGCCGTCTGCAACAAATCGATCCACCTTCATTGCTCGCACCAAACCCATCGGTTTCTGAAACCGCTCGTTCTGCATCACAGTATCTATTCACTACCCTCAGACCCTTCTCCCCAAAATCACCATTGGATGAGCTTCTCGTTGATGGTTACGATGCTGAGCAGATTTGGCATCAAATTGATCTTCAATCCCAGCCACTTTTGTCCACTCTTCGCCGCCGGTTGAATCAGTTTGTTAAAAATCCGGAAGAGATTGCACAGTTCAAGGTTCCTTTGGATGTTGGGAAGAAGTTGGAGAAAAAGAAGCGAGTGGAGTTAGAAGAAGAAGAAAGCGATGATTTTGATGAGGAATTGGATGATGATGATGATGATTTTGAAGGTGTTGAAAAGAAGAAGGCAAAAGGAGGAAGTGAAGGTGAAGACGATTTCGAAGAAGAAGATGACGAAGATGAAGAAGGAAGTGAGGATGAAGACGATGAGGAGGATGAAAAAGAGAAAGTTAAAGGTGGTGGAATTGAGGATAAATTTTTGAAAATAGATGAATTGACTGAATATTTAGAGAAGGAGGAAGATAATTACGAGAAAGGCGAGGAGAGGGATGAAGCTGATGAAGACAGTGAAGAAGATGATGAACTCGAGAAGGCTGGTGAGTTTGAGATGGATGATGAGGATGATGACGACGATGATGAAGAAGATGAAGAGGCAGAGGATATGGGAAATGTTAGGTATGAAGACTTCTTTGGAGGTAAAAATGAAAAGGGCTCAAAAAGAAAAGATCAATTGCTTGAAGTTTCTGGTGATGAAGATGACATGGAATCCACCAAACAGAAAAGGACTGCTTCTACCTATGAAAAGCAGCGGGAAAAAATTCAATCAAAGATAGTGCTGATGGAGAAAGCTAATATAGAGCCAAAAACTTGGACTATGCAGGGTGAGGTAACTGCTTCAAAGAGACCCATAAATAGTGCATTTGAAGTTGATCTTGATTTTGAGCATAATGTGAGACCTACACCTGTAATCACCGAGGAGGTTACAGCTTCAATTGAGGAGATGATCCAGAAAAAGATTGTTGAGGGGCTTTTTAACGATGTTCAAAGGGCTCCTAAGTTGCCATCGAAAGCGCCTCGGGAAGTTAAACAATTGGATGATAATAAAAGCGGGCAGGGTCTTGCAGATCTCTACGAGCAAGAGTATGTTCAGAAGACTGACCCCACTTCTGCTCCATTGTCATTCAAAGATGAACTAAAAAATGAGGCAAGCACGCTGTTTAAGAAAATCTGTCTGAAGCTGGATGCCCTTTCTCATTTCAACTTTGCTCCAAAACCTGTTATAGAGGACATGTCCTTTCAAACAAATGTACCTGCTCTGGCAATGGAAGAAATTGCTCCTGTGGCTGTTTCAGATGCTGCTATGCTGGCTCCTGAGGAGGTCTTTGATGGGAAGGGTGATGTTAAGGAAGAAGCAGAACTTACACAGGCAGAAAGGAAAAGGAGGAGAGCTAATAAGAAAAGAAAATTTAAAGCTGAGGCAGTAAACAAGTTGGAAAAGAAGGCAAGGTTGGAAAAGAAGGCAGACAATGCAATTTCTTGCCAAGTTGATGGCTAA 1638 0.4231 MANTNDAGVEALRRLQQIDPPSLLAPNPSVSETARSASQYLFTTLRPFSPKSPLDELLVDGYDAEQIWHQIDLQSQPLLSTLRRRLNQFVKNPEEIAQFKVPLDVGKKLEKKKRVELEEEESDDFDEELDDDDDDFEGVEKKKAKGGSEGEDDFEEEDDEDEEGSEDEDDEEDEKEKVKGGGIEDKFLKIDELTEYLEKEEDNYEKGEERDEADEDSEEDDELEKAGEFEMDDEDDDDDDEEDEEAEDMGNVRYEDFFGGKNEKGSKRKDQLLEVSGDEDDMESTKQKRTASTYEKQREKIQSKIVLMEKANIEPKTWTMQGEVTASKRPINSAFEVDLDFEHNVRPTPVITEEVTASIEEMIQKKIVEGLFNDVQRAPKLPSKAPREVKQLDDNKSGQGLADLYEQEYVQKTDPTSAPLSFKDELKNEASTLFKKICLKLDALSHFNFAPKPVIEDMSFQTNVPALAMEEIAPVAVSDAAMLAPEEVFDGKGDVKEEAELTQAERKRRRANKKRKFKAEAVNKLEKKARLEKKADNAISCQVDG* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3804 545 Pfam Mpp10 protein 50 281 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Mtr4g3804 545 Pfam Mpp10 protein 278 522 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Mtr4g3804 545 MobiDBLite consensus disorder prediction 251 298 - -
Mtr4g3804 545 MobiDBLite consensus disorder prediction 151 174 - -
Mtr4g3804 545 MobiDBLite consensus disorder prediction 498 517 - -
Mtr4g3804 545 MobiDBLite consensus disorder prediction 136 150 - -
Mtr4g3804 545 MobiDBLite consensus disorder prediction 175 206 - -
Mtr4g3804 545 Coils Coil 183 210 - -
Mtr4g3804 545 MobiDBLite consensus disorder prediction 110 298 - -
Mtr4g3804 545 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10 3 537 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Mtr4g3804 545 Coils Coil 494 534 - -
Mtr4g3804 545 MobiDBLite consensus disorder prediction 120 135 - -
Mtr4g3804 545 MobiDBLite consensus disorder prediction 207 250 - -
Mtr4g3804 545 PIRSF snoRNP_Mpp10 1 541 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3804 K14559 - gmx:100781093 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3804 4 51806757 51812650 Mtr4g3804 4 51806757 51812650 ECH