Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3801 ATGTCCAAATTCTTCACTACCTTCTTCCATCACCTAATCATTATATTCTCAATAGCATATTTAATCATCCCTTCAAGTTGTTCTAACAACACATGTAGATCATATTGTGGAAACATAACAATAGATTACCCATTTGCCCTCCAAAACGGATGTGGCCACCCAGGTTTCCGTGACCTACTCTTCTGCATAAACAACGTTCTCATGTTCCACGTAACCTCAGGTTCCTATAGAGTCCTACAAATAGATTACGCATACCAAGCTCTCACACTTCACGAACCACACATGTCTACGTGCGAAACACTAGTCCTAGGAAATAAAGGCAACGGTTTCGCGGTGGAACCGTGGCGGTCCCCATACATGAACCCAACACCTGACAACGTTTTCATGCTCATTTCTTGTTCGCCTCGTTCACCTTTGTTCCAAGGCTTCCCTGATAAACATTTGCCATGCAGAAATGTTTCTGGTATGGGATGTGAAGAGTATTATGGTTGTCCTGCTTGGAATATGATGGGACATAAAAGGACAGGTTCTTCTTCGTTTTTTGGGTCTGGTCCACCTGAGTGTTGTGCTGTGTCTTATGAAGCTATTAAGGGGATTAATCTAAGTAAGCTTGAGTGTGAAGGGTATAGTAGTGCTTATAGTGTGGCACCTTTGAAGGTTGATGGACCTAGTGATTGGGCTTATGGGATACGTGTGAGGTATTCTGTTCAAGGGAGTGATGAGTTTTGTGGTGCTTGTCAGGCTACTGGTGGTAGTTGTGGGTATGGTTCTGATGGGATAAGGCAAGTTTGTATGTGTGGAAACTTTAATTCAACTTCAAATTGTGACTCAGCAGTGGCCTTATTATCATCGGGAGCAAGAAGGCCTATGAGGTTGAAAATGTTTGCAGGACTTTTGGCCTATATGCTAGCATGGATGATAACCAGCTGGATTTGA 936 0.4295 MSKFFTTFFHHLIIIFSIAYLIIPSSCSNNTCRSYCGNITIDYPFALQNGCGHPGFRDLLFCINNVLMFHVTSGSYRVLQIDYAYQALTLHEPHMSTCETLVLGNKGNGFAVEPWRSPYMNPTPDNVFMLISCSPRSPLFQGFPDKHLPCRNVSGMGCEEYYGCPAWNMMGHKRTGSSSFFGSGPPECCAVSYEAIKGINLSKLECEGYSSAYSVAPLKVDGPSDWAYGIRVRYSVQGSDEFCGACQATGGSCGYGSDGIRQVCMCGNFNSTSNCDSAVALLSSGARRPMRLKMFAGLLAYMLAWMITSWI* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3801 311 Pfam Wall-associated receptor kinase galacturonan-binding 32 90 IPR025287 GO:0030247
Mtr4g3801 311 PANTHER WALL-ASSOCIATED RECEPTOR KINASE GALACTURONAN-BINDING PROTEIN 13 297 - -
Mtr4g3801 311 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 13 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3801 Mtr-Chr4 51792447 51794249 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3801 12 139 Receptor kinase-like Gene Family AT1G21240 29.323 5.66e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3801 - - gmx:100818252 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3801 4 51792447 51794249 Mtr4g3801 4 51792447 51794249 ECH