Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3791 ATGTCATCAACCGTAAGAGATCATAGGATAGTTCGCCGAATGACAAGCCTTCCTCGGAGCATAATGAGCTTTGTAGGAATAGGAAGAAGAAGAAGAAATCAAAATGCAAACTTTCCATTACAATTTTTAGACCCTCCACAACCACAAAATTCCTTAGCAGCTCCAGAAGAATGGGCTTTTCACGATAATTTTGAGCAACAATATGGCAACAAACATCCCTTCTTTTACGCTTGTCGTTTCAATGAAGCTATGAAGTTAGCAGAACAAGATCAAAAATTTGTGTTCATGTATCTTCATTCAGTAGACCACCCTTTTGCAAACGTGTTCTGCAAGGAAACTCTGTGTTCGGAGCTAGTGATTCAGTTTCTTGATGTGAATTTTGTTTGTTGGGGTGCACTTACAGATAGAGGAGAGGGTTTGCAAATGGTTTCAAGACTAAGGCCTACTAACTTTCCTTGTTGTGCTGTTATAAGTTCTGCTCCTAATAATAGCATAATTGTGTTGCAACAGTTAGAGGGACCACTCTCACCAACAGAGCTAGTTGAGATTCTACAAACAACATTGGAAGAACAAGGGCTGGCTTTTGGAAGTGATAAAGCTAAGCGAGATGAAAAGATCCGAGCAGATCGTAAACTCAGAGAAGAACAAGATGCTGCATATCTTGAGGCTTTGAAAATAGACAAGGAAAAAGAAAGGACCAAAAGTTTACCTTCAAGAGAGAGAGCTCAGAAGCCAGTGGAAACTCAAAAAAACACTAGAAATTATGAGAAGTTAAGGAGCAACCCTGTCAATGTTAGTAAATTTCGTGAGAATAACAAAGGAAATGGATCCACTGGTGAAAAGAATGGCAAGGGAATCACAAGTAGCGGGAACGCGACTCAAGTTGCACAGATACTCATAAGGTTTCCAAATGGAGAAAGAAGAGAACATACTTTCCTATGCACGGACAAAATTCAGTCTATTTTCTCGTATATCGATTCATTAGGCTTGTCTGGAATTGAGAACTACAGACTCATATCAAATTTTCCTAGAAGGGTTTATGGTGTTGATCAAATGAGAATGACTCTCAAAGATGTTGGCTTGTATCCTAAAGCTAGTTTGTTCTTGGAGCCTTTGTGA 1119 0.3923 MSSTVRDHRIVRRMTSLPRSIMSFVGIGRRRRNQNANFPLQFLDPPQPQNSLAAPEEWAFHDNFEQQYGNKHPFFYACRFNEAMKLAEQDQKFVFMYLHSVDHPFANVFCKETLCSELVIQFLDVNFVCWGALTDRGEGLQMVSRLRPTNFPCCAVISSAPNNSIIVLQQLEGPLSPTELVEILQTTLEEQGLAFGSDKAKRDEKIRADRKLREEQDAAYLEALKIDKEKERTKSLPSRERAQKPVETQKNTRNYEKLRSNPVNVSKFRENNKGNGSTGEKNGKGITSSGNATQVAQILIRFPNGERREHTFLCTDKIQSIFSYIDSLGLSGIENYRLISNFPRRVYGVDQMRMTLKDVGLYPKASLFLEPL* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3791 372 CDD UAS 80 190 - -
Mtr4g3791 372 Gene3D - 291 371 - -
Mtr4g3791 372 PANTHER FAS-ASSOCIATED PROTEIN 8 371 - -
Mtr4g3791 372 MobiDBLite consensus disorder prediction 255 289 - -
Mtr4g3791 372 SMART 45neu3 59 185 IPR006577 -
Mtr4g3791 372 MobiDBLite consensus disorder prediction 231 289 - -
Mtr4g3791 372 SUPERFAMILY Thioredoxin-like 54 193 IPR036249 -
Mtr4g3791 372 CDD UBX 298 370 - -
Mtr4g3791 372 Pfam UBX domain 293 370 IPR001012 GO:0005515
Mtr4g3791 372 PANTHER UBIQUITIN-ASSOCIATED (UBA) PROTEIN-RELATED 8 371 - -
Mtr4g3791 372 MobiDBLite consensus disorder prediction 231 254 - -
Mtr4g3791 372 Gene3D Glutaredoxin 55 193 - -
Mtr4g3791 372 ProSiteProfiles UBX domain profile. 291 369 IPR001012 GO:0005515
Mtr4g3791 372 SUPERFAMILY Ubiquitin-like 237 371 IPR029071 -
Mtr4g3791 372 SMART ubx_3 289 371 IPR001012 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3791 Mtr-Chr4 51719540 51721783 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3791 K18726 - gmx:100775212 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3791 4 51719540 51721783 Mtr4g3791 4 51719540 51721783 ECH