Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3768 ATGGTTTCTTCTTTCGCGGTCAAGGTGAGATTTGGAGATGCCTACAGGCGCTTCAATGTTTCTGTGGATGACAATAACCAGATTGATCTCGATATGGCTGGTTTGAGGGCTAAGATAAGGTCTATTTTTTATTTTACTGATGATGCAAAATTCACTCTGAGCTATGTTGATGAAGATGCCGAGATGGTGAATCTTGTGGATGATAATGATTTGAATGACCTGATGAACCAACGATACAAATTCTGGAGAATTTATGTTCGCGAGAATGAGAATGGAATCTTGCCATTGAAATTCTCTCAATGGAGAAATATGATCCATAAATCTGTCTGCAAACTAATGCAGAAGGAAGAAGCAATATATTATGGTTCTGCTTTTGTGGCTTGGGTTGGGTTGTTATCAGCGATTATTTTCGCTAAACCAAATGTCCAAGTCGTCCAACCTCCACCCCCGCCTCCATCCGTTAGTAAAGGTTGGTTTTGGTAG 483 0.4037 MVSSFAVKVRFGDAYRRFNVSVDDNNQIDLDMAGLRAKIRSIFYFTDDAKFTLSYVDEDAEMVNLVDDNDLNDLMNQRYKFWRIYVRENENGILPLKFSQWRNMIHKSVCKLMQKEEAIYYGSAFVAWVGLLSAIIFAKPNVQVVQPPPPPPSVSKGWFW* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3768 160 PANTHER OVARIAN CARCINOMA ANTIGEN CA125-RELATED 5 88 - -
Mtr4g3768 160 PANTHER PROTEIN ILRUN 5 88 - -
Mtr4g3768 160 ProSiteProfiles PB1 domain profile. 4 89 IPR000270 GO:0005515
Mtr4g3768 160 Pfam PB1 domain 5 88 IPR000270 GO:0005515
Mtr4g3768 160 Gene3D - 2 89 - -
Mtr4g3768 160 SUPERFAMILY CAD & PB1 domains 4 87 - -
Mtr4g3768 160 SMART PB1_new 4 89 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3768 Mtr-Chr4 51445059 51447232 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3768 - K17987 mtr:MTR_4g104960 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3768 4 51445059 51447232 Mtr4g3768 4 51445059 51447232 ECH