Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3761 ATGAATCGCATGAAAGCAATAACCACTTCCCTCAAATTCCTCAAATCATCATCATCATCATCACGCGCTACACAAGTTCTTGCAACTGGGTACCAGGTTTCTCATTTTTCTTCTTCCTCCTTTTCACTTCCTATGTTGAATCGTTCACACAATTTATTACCTTTTCACAACAGTCATAAAAAACACTATTTTTCTTCAAAACCCAACTCAATTTTAGAGCGTGTTTACACCAATGATTGGTCTGAAGAGTTAGAGAAAGAATTTGAAGAATGTCGTGAATCATTGACCCATGAAACTGTTGTTTATGTTTTGAAGCGATTGGATAATAACCCTCTTAAAGTTTTCACCTTTTTCAATTGGGTCAGTGAGAAAGAGTGGTTTATGGCTAGTTCTTCGGCTTATAGCTTGGTTCTCAGGATTTTAGCTAGGAATAAGAATATGAAAGAGTTTTGGATTGTTCTTAAGGCTATGAAGGAAAATGGGTTTTATTTAGATGAAGAGACACATTTGATACTTTCGGCAGATTTGAAAAAGGCGAAGATGAAGAGTGATGTTGTTGAGTATTCACGTTTCTATAAAGGGATGCTTGAGCAGGATGCAATGCAGAGTGTTGTCAAAAAGGTGGTTGGTATTATTTCAGGGTCTGATTGGGACAATGAGATTGAGAATGAACTCGAGAAGGTTAAAATTCAACTTTCGGACAATTTCGTGATTAGGGTTATGAAAGAGCTTCGAAATAGTCCTTTAAAGGCTTATAAGTTTTTTCATTGGGTTGGAAAGCAATCTGGTTATCTACAGAATACAGTGACTTATAATGCAGTTGCTAGAGTTCTTCCTAGAATGGAGTCAATTGAGAAGTTTTGGAGTATTCTTGAGGAGATGAAGAGTGTCGGTCATGAATTGGATCTTGATACTTACATTAAGATATCGAGGCAGCTTCTAAATAATAGGATGATGGAGGACAGTGTCAAGCTTTACGAGCATATGATGGATAGTTCATATAAGCCTACAGCTCCGGATTGCATTGTGCTTTTAAAGAGCCTATCTACAAAGGATAAGCCAGATTTGGATTTAGTTTTCAGGGTAACTAAGAAATTTGAGTCAACAGGGTATACTCTTTCCAAGGCAGTCTATGATGGTATTCATAGGTCTTTGACAGGTGCTGGGAAATTTGATGAAGCTGAAAAGATTGTCGAGACCATGAAAAATGCTGGCTACGAACCAGATAACATCACATACAGTCAACTTATTTTCGGATTTTGTAAGACGAGGAGGTTCAAAGAAGCACTTAAGGTAATCGATCATATGCAAGCTATCAATCTTTGGGTTGACATCAAGACTTGGACCATCTTGATCCAAGGGTACTGTGATGCCGGCGAACTAGATGGTGCGTTACTTGGTCTTTATAAGATGATGGAAAAGTCTTCCAGTCCAGATGCTGAATTGTTGGAAGTACTGGTTGATGGTTTTATTAAGCAAAAGAGAATAGACGATGCATACAAGTTGCTTCTAGAGATATCTGGCAAGTGTCATTTAAGTCCATGGCAAGCTACATTCGAGAAACTGATTGATAGTCTATTAAGAGTCAGAAAGTTTGAGGAGGCGCTCGACCTTCTTCGTTTGATGAAGTCTAAACAATGCTCTCCATACCATGAACCATTTGCATCATATATTTCGAAGTTTGGGACCGTGGAGGATGCTGTGGAATTCCTGAAAGCATTGAGTATAAAAAATTACCCATCTCAAACAGTTTACCTCCAAATTTTTGAATCCTTATTTCAAGAAGGTAGACTTTCAGAGGCCAAAGATCTATTGTACAGGTGTCCTCACCATATCCGGGAAAATATTAAAATCTCCAAACTTTTTGATTCATCCAAGAGTCAGGCGACCGAGAGTCAAATGGCTGCTACTTGA 1914 0.3819 MNRMKAITTSLKFLKSSSSSSRATQVLATGYQVSHFSSSSFSLPMLNRSHNLLPFHNSHKKHYFSSKPNSILERVYTNDWSEELEKEFEECRESLTHETVVYVLKRLDNNPLKVFTFFNWVSEKEWFMASSSAYSLVLRILARNKNMKEFWIVLKAMKENGFYLDEETHLILSADLKKAKMKSDVVEYSRFYKGMLEQDAMQSVVKKVVGIISGSDWDNEIENELEKVKIQLSDNFVIRVMKELRNSPLKAYKFFHWVGKQSGYLQNTVTYNAVARVLPRMESIEKFWSILEEMKSVGHELDLDTYIKISRQLLNNRMMEDSVKLYEHMMDSSYKPTAPDCIVLLKSLSTKDKPDLDLVFRVTKKFESTGYTLSKAVYDGIHRSLTGAGKFDEAEKIVETMKNAGYEPDNITYSQLIFGFCKTRRFKEALKVIDHMQAINLWVDIKTWTILIQGYCDAGELDGALLGLYKMMEKSSSPDAELLEVLVDGFIKQKRIDDAYKLLLEISGKCHLSPWQATFEKLIDSLLRVRKFEEALDLLRLMKSKQCSPYHEPFASYISKFGTVEDAVEFLKALSIKNYPSQTVYLQIFESLFQEGRLSEAKDLLYRCPHHIRENIKISKLFDSSKSQATESQMAAT* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3761 637 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 374 408 IPR002885 -
Mtr4g3761 637 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 409 443 IPR002885 -
Mtr4g3761 637 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 444 478 IPR002885 -
Mtr4g3761 637 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 267 301 IPR002885 -
Mtr4g3761 637 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 302 336 IPR002885 -
Mtr4g3761 637 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 515 549 IPR002885 -
Mtr4g3761 637 TIGRFAM PPR: pentatricopeptide repeat domain 518 549 IPR002885 -
Mtr4g3761 637 TIGRFAM PPR: pentatricopeptide repeat domain 447 480 IPR002885 -
Mtr4g3761 637 TIGRFAM PPR: pentatricopeptide repeat domain 411 437 IPR002885 -
Mtr4g3761 637 Gene3D Tetratricopeptide repeat domain 356 508 IPR011990 GO:0005515
Mtr4g3761 637 Pfam Pentacotripeptide-repeat region of PRORP 355 473 IPR033443 -
Mtr4g3761 637 PANTHER OS01G0970900 PROTEIN 1 625 - -
Mtr4g3761 637 Gene3D Tetratricopeptide repeat domain 509 578 IPR011990 GO:0005515
Mtr4g3761 637 Pfam PPR repeat 133 162 IPR002885 -
Mtr4g3761 637 Pfam PPR repeat 522 547 IPR002885 -
Mtr4g3761 637 PANTHER OS01G0970900 PROTEIN 1 625 IPR044578 GO:0008380
Mtr4g3761 637 Gene3D Tetratricopeptide repeat domain 216 355 IPR011990 GO:0005515
Mtr4g3761 637 Gene3D Tetratricopeptide repeat domain 71 212 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3761 Mtr-Chr4 51396260 51398473 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3761 269 605 Miscellaneous Gene Families AT4G11690 26.377 5.97e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3761 - - gmx:100815857 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3761 4 51396260 51398473 Mtr4g3761 4 51396260 51398473 ECH