Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3730 ATGGCTCCTTCTATGTCAACAATAACTCTCATTACCATATACACATTCTCCTTACTTTTTTCAATAACTTCTTCAGCAACATCAACTGCAGAACAACCTTCAAGACCCTTCAAGAAAATTTACGCCTTTGGAGACTCTTTCACAGACACAGGCAACACACATAACGCTGAAGGTCCAAGTGGTTTTGGCCATGTATCAAACTCACCATATGGAACAACTTTCTTCAACCATTCCACAAACAGATACTCTGATGGAAGACTTGTTATTGACTTTGTCACAGAATCACTTTCTTTGCCTTATCTTCCTCCTTATCGCCACATCAAAAGATCGAACGATACTTTTGGTGTTAACTTCGCTGTTGCTGGTTCAACAGCTATAAACCATGAATTCTTTGTTAGGAATAATCTTTCTCTTGACATCACTCCTCAGTCTATTCAAACTCAGATATTGTGGTTTAATAAGTACTTGGAGAGCCAAGGTTGTCAAGGAGTTGATTCAAAGTGTAAAGATTTTGATGAGACTCTTTTTTGGTTTGGTGAAATTGGTGTTAATGATTATGCTTACACTCTTGGATCTACAGTCTCAGAAGATACTATAAGGAAGCTTGCAATGTCCAGTGTCTCAGGAGCTTTACAGTCATTGCTTGAGAAGGGTGCCAAGTACCTAGTTGTGCAAGGTCATCCACCAACAGGGTGCCTTACACTGACAATGTATTTAGCTCCTGAAGATGACAGAGACGACTTAGGGTGTGTGAAAAGTGCTAATGACCTAAGCAACAATCACAACCTTATGCTGCAAGCTAGATTACAAGAATTCAGGAAACAGTATCCACATGCAGTCATAGTTTATGCTGATTACTTCAATGCCTACCGTACTGTGATGAAGAATCCAAGCAAGTATGGATTCAAAGATTTGTTCAGTGTCTGCTGTGGATCAGGAGAACCTCCTTACAACTTCACTGTGTTTGAAACTTGTGGTACACCTAATGCTACTGTCTGCACTAGCCCTTCTCAGTATATTAATTGGGATGGTGTTCATCTTACAGAAGCTATGTATAAGGTTGTTTCTAATATGTTTCTTCAAGGAAATTACAGCCAACCTCCATTTGATTTTTTGTTAGAAAACAAAGAGAGACATGGCTGA 1143 0.392 MAPSMSTITLITIYTFSLLFSITSSATSTAEQPSRPFKKIYAFGDSFTDTGNTHNAEGPSGFGHVSNSPYGTTFFNHSTNRYSDGRLVIDFVTESLSLPYLPPYRHIKRSNDTFGVNFAVAGSTAINHEFFVRNNLSLDITPQSIQTQILWFNKYLESQGCQGVDSKCKDFDETLFWFGEIGVNDYAYTLGSTVSEDTIRKLAMSSVSGALQSLLEKGAKYLVVQGHPPTGCLTLTMYLAPEDDRDDLGCVKSANDLSNNHNLMLQARLQEFRKQYPHAVIVYADYFNAYRTVMKNPSKYGFKDLFSVCCGSGEPPYNFTVFETCGTPNATVCTSPSQYINWDGVHLTEAMYKVVSNMFLQGNYSQPPFDFLLENKERHG* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3730 380 Pfam GDSL-like Lipase/Acylhydrolase 40 357 IPR001087 GO:0016788
Mtr4g3730 380 PANTHER LIPASE/HYDROLASE FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 8 377 - -
Mtr4g3730 380 SUPERFAMILY SGNH hydrolase 37 360 - -
Mtr4g3730 380 CDD SGNH_plant_lipase_like 40 363 IPR035669 -
Mtr4g3730 380 Gene3D SGNH hydrolase 26 363 IPR036514 -
Mtr4g3730 380 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 8 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3730 Mtr-Chr4 51035974 51037686 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3730 21 364 Acyl Lipid Metabolism Gene Families AT4G10950 25.978 1.26e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3730 - - lja:Lj4g3v1389220.1 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3730 4 51035974 51037686 Mtr4g3730 4 51035974 51037686 ECH